Gene Information

Name : Q7S_17510 (Q7S_17510)
Accession : YP_005403282.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3821939 - 3823231 bp
Length : 1293 bp
Strand : +
Note : COG3486 Lysine/ornithine N-monooxygenase

DNA sequence :
ATGCCCGTGAAGGATTTAATTGGTATTGGTATCGGCCCCTTTAATTTAAGTCTCGCCGCCATGGCAAAAGACACAGAAAA
ACTCAACGCCGCTTTCTTTGATGCTAACCCGGAATTCAGCTGGCATCCCGGTATGTTATTACCCACGGCGACCATGCAGA
CCTACGTCCTGCAGGATCTGGTCACTACCGTTGCGCCGCGCAGCGAATTTTCGTTTATTAATTATCTGGTTGATCAGAAG
AAGATTTACCGTTTTCTGGCCACGGAACAGCTGATCATCAGCCGCGATGAGTTTTCCGACTATCTGCGCTGGGCGTGTGA
CCGCATTGCGGGTTTGCATTTTTCCGAACCGGTTGAGCGCATTGATTTCGACGATAAGCGACAGGAATTTATCGTACAGA
GTGAAAAAGGCGAGCACCGCGCGCGCAATATTTGCCTCGGCACCGGCCATGCGCCGTGGATCCCAAAACCGGCACGGGCG
GCGCTGGGTGATAACTGTTTTCACGCCGCAGAAATAGAACTACGTGAGCCAGATTTCACCGGTAAACGTGTGGTTGTTGT
CGGCGGCGGACAAAGCGGTGCCGACATCGTTCTCAACGCGCTGAGCGGCCACTGGGGCGAGTTCACCGAACTGAGCTGGA
TATCACGACGCCCTAATTTCCAGCCGCTGGATGAATCCATTTTCACCAATGAGTATTTCACGCCGGAGTATGTGAATTAC
TTTTATACGCTGCCGGAAGAGGTGCGCGAGCAGGAAATCGAAACACAAAAACTGCCCTCTGATGGCATCAGTTATCACAC
GCTCGAAGACATCTACAAGCAGCTTTATCACCGTTTCGATGTGCTGCATCAGCGGCGTAACGTGCGTTTGTTGCCGCACC
GTGCACTGGATCATATCGTGCGTAATGCGGCCGGCGATTTCAGTTTGCAGGCAAAACACGGGCTGGAAAAATGCGAGGAA
CATTTCAGTGCCGATATTGTGATCCTGGCAACCGGCTACCGTCCCGGTTTGCCGGATTATCTCGAGCCATTGCTGGATCG
TATTCCTTATGACCGCGAGCAGCATCTGCCGCTGCAGCCGAATTTCAATCTGCGCTGGGACGGCCCGGAGCAGAACCGCA
TTTACGCGGTGAATGCCGGTATTCACAGCCACGGCAGCGCCGAGGGGCAACTGACACTGACTGCGTGGCGATCGGCGAAA
ATTCTCAATCATCTGCTGGGCGAAGCGCATTACGATCTGCGGCCGGTGCCTTCACTGGTGCAATGGTGGTCGGACGACGC
GGGTAAGAAATAG

Protein sequence :
MPVKDLIGIGIGPFNLSLAAMAKDTEKLNAAFFDANPEFSWHPGMLLPTATMQTYVLQDLVTTVAPRSEFSFINYLVDQK
KIYRFLATEQLIISRDEFSDYLRWACDRIAGLHFSEPVERIDFDDKRQEFIVQSEKGEHRARNICLGTGHAPWIPKPARA
ALGDNCFHAAEIELREPDFTGKRVVVVGGGQSGADIVLNALSGHWGEFTELSWISRRPNFQPLDESIFTNEYFTPEYVNY
FYTLPEEVREQEIETQKLPSDGISYHTLEDIYKQLYHRFDVLHQRRNVRLLPHRALDHIVRNAAGDFSLQAKHGLEKCEE
HFSADIVILATGYRPGLPDYLEPLLDRIPYDREQHLPLQPNFNLRWDGPEQNRIYAVNAGIHSHGSAEGQLTLTAWRSAK
ILNHLLGEAHYDLRPVPSLVQWWSDDAGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-110 52
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 3e-111 52
iucD AAD44749.1 IucD Virulence SHI-2 Protein 2e-110 52
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-110 52
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-110 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_17510 YP_005403282.1 L-lysine 6-monooxygenase VFG0618 Protein 1e-110 52
Q7S_17510 YP_005403282.1 L-lysine 6-monooxygenase VFG0937 Protein 1e-111 52
Q7S_17510 YP_005403282.1 L-lysine 6-monooxygenase VFG1084 Protein 1e-110 51