Gene Information

Name : Q7S_15980 (Q7S_15980)
Accession : YP_005402976.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 3489927 - 3491993 bp
Length : 2067 bp
Strand : +
Note : COG2216 High-affinity K+ transport system, ATPase chain B

DNA sequence :
ATGAGTCGTAAACAACGTGCGTTATTTGAACCCCGTCTGATCCGCACTGCCCTGCTGGATTCGGTGAAAAAACTGGATCC
CCGTGTTCAGTGGCGCAATCCGGTGATGTTCGTGGTGTATCTGGGCAGCATTCTGACCACACTGATCTGGCTGGCAATTC
TGCTGCACCGGACCGACGGCAGCGCGGCTTTTACCGGCAGCGTGTCGCTTTGGCTGTGGTTTACCGTGCTGTTCGCCAAC
TTCGCCGAAGCACTGGCGGAAGGCCGCAGCAAGGCGCAGGCGCAGAGCCTGAAAGGCGTGCAGAAAACCAGTTGGGCGAA
AAAAATCTACGAACCACGCCCTGAATCGCCGGTGATTAAAGTCGCCGCCGATACCCTGCGCAAAGGCGATTACGTGCTGA
TCGAAGCAGGCGATACCGTGCCATGCGACGGTGAAGTGCTGATCGGCGGTGCGTCGGTGGATGAAAGCGCCATTACCGGT
GAATCTGCGCCGGTGATCCGCGAATCCGGCGGCGACTTCTCCTCGGTCACCGGCGGGACGCGCGTCTTGTCAGACTGGCT
GGTGGTCGAATGTTCGGCGAACCCAGGCGATACCTTCCTCGACCGTATGATTGCGATGGTCGAAGGTGCGAAACGCCGCA
AAACGCCAAACGAAGTGGCGCTGACGATTTTGCTGGTGGCGCTGACGCTGGTGTTCGTGCTGGCTCCCGCCACGCTGTAT
CCGTTCTCGCTGTTCAGTGTTGACGCCAGTCACGCTGGTATTCCGGTGACTGTCACCGTGCTGGTCGCCCTGCTGGTGTG
TCTGATCCCGACCACCATCGGCGGTTTGCTGTCGGCGATTGGCGTGGCGGGTATGAGCCGCATGCTGGAAGCGAACGTCA
TCGCCACCAGCGGCCGTGCGGTGGAAGCCGCCGGTGACGTGGATGTGCTGCTGCTGGATAAAACCGGCACCATCACGCTC
GGTAACCGCCAGGCATCGCAGTTCCTGCCCGCGCCGCAGGTGACGGAACAGGAACTGGCCGATGCCGCGCAGTTATCCTC
TCTGGCTGATGAAACGCCGGAAGGCCGCAGTATTGTGGTGCTGGCGAAGCAGCGCTTTAACCTGCGTGAACGCGATATTC
ATTCGCTGAATGCAACCTTCGTGCCCTTCTCCGCGCAAACCCGCATGAGCGGCGTCAACGTCGGTGACCGCAGCATCCGT
AAAGGGGCGGTTGACGCTATCCGTCGCCATGTGGAATCCAACGGCGGTACCTTCCCGAAAGCCGTCGAGGGGCTGGTGGA
AACCGTGGCGCGTAAAGGCGGCACGCCGCTGGTGGTAGCAGAAGGCGCTAAAGTACTGGGCGTGGTTGAGCTGAAAGATA
TTGTCAAAGGCGGTATCAAGGAACGCTTTGCCGAGCTGCGCAAAATGGGCATTAAAACGGTGATGATCACCGGGGATAAC
CGCCTGACCGCCGCCGCGATTGCCGCCGAAGCGGGCGTGGATGATTTTCTGGCGGAAGCCACACCGGAAGCCAAACTGGC
ATTGATTCGTCAGTATCAGTCAGAAGGTCGTCTGGTGGCGATGACCGGCGACGGTACCAACGATGCGCCGGCGCTGGCAC
AGGCCGATGTCGCGGTGGCGATGAACTCCGGGACGCAGGCAGCGAAGGAAGCCGGGAACATGGTCGATCTCGACTCCAAC
CCGACCAAGCTGATTGAAGTGGTGCATATCGGTAAACAAATGCTGATGACACGCGGCTCGCTGACCACCTTCAGTATTGC
CAACGACGTGGCGAAGTATTTCGCCATTATCCCGGCGGCGTTCGCGGCAACCTATCCGCAACTCAATGCGCTGAACGTGA
TGCACCTGACGTCGCCGTCTTCGGCCATTATGTCGGCGGTCATTTTCAACGCCCTGGTGATTGTGTTCCTGATCCCGCTG
GCGCTGAAAGGGGTGAGCTATAAAGCCATGAGTGCCGCCGCCCTGTTGCGCCGTAACCTGTGGATTTATGGTGCGGGCGG
GCTGCTGGTGCCGTTTGTGGGTATCAAGCTGATAGACGTGATCCTGACCGTTTTACATCTGAGCTGA

Protein sequence :
MSRKQRALFEPRLIRTALLDSVKKLDPRVQWRNPVMFVVYLGSILTTLIWLAILLHRTDGSAAFTGSVSLWLWFTVLFAN
FAEALAEGRSKAQAQSLKGVQKTSWAKKIYEPRPESPVIKVAADTLRKGDYVLIEAGDTVPCDGEVLIGGASVDESAITG
ESAPVIRESGGDFSSVTGGTRVLSDWLVVECSANPGDTFLDRMIAMVEGAKRRKTPNEVALTILLVALTLVFVLAPATLY
PFSLFSVDASHAGIPVTVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLEANVIATSGRAVEAAGDVDVLLLDKTGTITL
GNRQASQFLPAPQVTEQELADAAQLSSLADETPEGRSIVVLAKQRFNLRERDIHSLNATFVPFSAQTRMSGVNVGDRSIR
KGAVDAIRRHVESNGGTFPKAVEGLVETVARKGGTPLVVAEGAKVLGVVELKDIVKGGIKERFAELRKMGIKTVMITGDN
RLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQSEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSN
PTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNVMHLTSPSSAIMSAVIFNALVIVFLIPL
ALKGVSYKAMSAAALLRRNLWIYGAGGLLVPFVGIKLIDVILTVLHLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-160 63
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-160 63
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-137 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-137 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-137 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-137 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-137 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-138 55