Gene Information

Name : Q7S_15305 (Q7S_15305)
Accession : YP_005402841.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3354414 - 3355274 bp
Length : 861 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGTCTCTGTACAGCATCGGTGAAGTCGCCCGAATTTGTGGTATCAACCCCGTCACGTTGCGTGCCTGGCAGCGGCGTTA
TGGCCTGCTGAAGCCACAGCGCACAGAGGGTGGCCATCGTCTGTTTAATGATGATGATCTCGACACCATCCGCACCATTC
TGGGCTGGATCAATCGCGGTATTCCGGTTGGTCAGGTGAAATCTTTGCTGGAAGGTAAAGTGGACGTGCTACCCGGTGGC
TGGTCGCAGTCAGAACATCAGCTGCTGACCGCCTTACAGGATGGCCGCCCGCAAAAAGTTCGTCAGTTGATGCTGGAGTT
CGGTCGTGAATACCCGGCGGTAACATTTGTGAATAACGTGCTTCGCCCCCTGCGTGAGCGCCTGAGTTCCGGCGATTCAC
GACTGCTGATGCTGCGCAGCCAGCTTGACGGTCTGATCATTGAACACGCGGTGATGTGCATGAACGCCGCCCGTAAGCGT
CCCGGACCGGCTGCCACGCTGATCGGCTGGGGGAACACAGACAGCACCGAGTTGTGGCTTGAGGCCATTGTGCGGTGCGA
AGAAGGTTTGCAGGTCGAAATATTGCCGGTTCCTCTCAGCGAGCCGTATCTGGAAAACCTGAGCGGCTCGCAAATTCTGT
TGTGGTCCGAAGGCAAGCTGACGCAGGTTCAGCGCCAGCGGCTGCAGCACTGGATGGCGCAGGGTTTGTCGATCATCCTG
CTGGGCAGCTCAGCTATCCTGCTCGGCGCAGAAGAAACAGACGCTAAGGAAGATGAGCTCAGCGCCTCCCCCGATGACGA
TGATCATCGCGCCAGTCTTCGTATTGAGCCTGTTCGCCGGGAAGGAAAAAATGATGCTTAA

Protein sequence : 
MSLYSIGEVARICGINPVTLRAWQRRYGLLKPQRTEGGHRLFNDDDLDTIRTILGWINRGIPVGQVKSLLEGKVDVLPGG
WSQSEHQLLTALQDGRPQKVRQLMLEFGREYPAVTFVNNVLRPLRERLSSGDSRLLMLRSQLDGLIIEHAVMCMNAARKR
PGPAATLIGWGNTDSTELWLEAIVRCEEGLQVEILPVPLSEPYLENLSGSQILLWSEGKLTQVQRQRLQHWMAQGLSIIL
LGSSAILLGAEETDAKEDELSASPDDDDHRASLRIEPVRREGKNDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 2e-49 46
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 2e-49 46
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 5e-49 45
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 2e-49 45
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 2e-49 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_15305 YP_005402841.1 putative DNA-binding transcriptional regulator VFG0491 Protein 9e-50 45