Gene Information

Name : Q7S_13995 (Q7S_13995)
Accession : YP_005402581.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3086863 - 3087891 bp
Length : 1029 bp
Strand : +
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence : 
ATGAGTAGCATGAGCCCTCCGGTGCCGTCAGGTCGCCGTTCGCCAGTTTGGGCGATGATTGGCCTTGGCGGCGCTCTGCT
GGTGCTGGCCGTGATGGCCGCGAATACCGGCGCGATGTCACTGTCGTTAAGGACGTTACTCGCACGTCCATTTGGCGATA
GTTTATGGCAGGTCTGGCTGACAATCCGCCTTCCCCGCGTGCTGCTGGCTGTGGTAGTCGGTTGCGCGCTGGCCAGTTCC
GGTGCGGTTATGCAGGGATTGTTTCGCAACCCGCTGGCGGACCCCGGCCTGCTTGGGATCAGCAGCGGCGCGGCGCTTGC
GGTTGCCCTGACTATAGTGATGCCACTGGCATTGCCACCCTTGCTGGCCCTGTACAGCCATATGATCAGCGCATTTGCTG
GCAGTCTGGCCATTTCAGCCATCGTCTTTACACTGAGTCGTTTCGGCCATGGTGGGTTATCGCGCTTACTGCTTGCCGGT
ATTGCCATCAATGCACTGTGCGGTGCCGCTGTCGGCGTGCTGACCTACGTCAGTGATGACCAGCAGTTACGCCAGTTCTC
TTTGTGGAGCATGGGCAGTCTCGGGCAGGCGCAATGGCCGACACTGGCTGTGGCCTCTTCGTTGATCCTGCCAGCCTGTG
TTGCGGCCCTGTTCATGGCGCGGCGCCTGAATATCCTGCAATTAGGTGAAGAAGACGCGCACTATCTCGGTGTGAATGTC
CGCCGCACGCAGTTGCAATTATTGCTGCTTAGCGCCCTGCTGGTCGGGGCTGCTGTCGCGGTTTCTGGTGTGATCGGTTT
TATCGGTCTGGTGATCCCGCACCTGTTGCGGATGCGTATTGGCGCAGACCACCGCTGGCTATTACCGGGATCGGCCATGG
CCGGTGCCTGCCTGCTTTTGCTCGCAGACACGCTGGCCCGCACACTGGTTGCTCCGGCAGAAATGCCGGTGGGATTGCTC
ACCAGCCTGATTGGCGGGCCGTATTTCTTATGGCTGATCCTGCGCCCGGGAGTTCCGCGTAATGTCTGA

Protein sequence : 
MSSMSPPVPSGRRSPVWAMIGLGGALLVLAVMAANTGAMSLSLRTLLARPFGDSLWQVWLTIRLPRVLLAVVVGCALASS
GAVMQGLFRNPLADPGLLGISSGAALAVALTIVMPLALPPLLALYSHMISAFAGSLAISAIVFTLSRFGHGGLSRLLLAG
IAINALCGAAVGVLTYVSDDQQLRQFSLWSMGSLGQAQWPTLAVASSLILPACVAALFMARRLNILQLGEEDAHYLGVNV
RRTQLQLLLLSALLVGAAVAVSGVIGFIGLVIPHLLRMRIGADHRWLLPGSAMAGACLLLLADTLARTLVAPAEMPVGLL
TSLIGGPYFLWLILRPGVPRNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecC AAL08453.1 FecC Virulence SRL Protein 3e-13 41
fecD AAL08452.1 FecD Virulence SRL Protein 7e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_13995 YP_005402581.1 transport system permease BAC0163 Protein 5e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_13995 YP_005402581.1 transport system permease VFG0922 Protein 2e-65 67
Q7S_13995 YP_005402581.1 transport system permease VFG1044 Protein 2e-13 41
Q7S_13995 YP_005402581.1 transport system permease VFG1043 Protein 4e-16 41
Q7S_13995 YP_005402581.1 transport system permease VFG0926 Protein 8e-17 41