Gene Information

Name : pspF (Q7S_13695)
Accession : YP_005402521.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : phage shock protein operon transcriptional activator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3020134 - 3021141 bp
Length : 1008 bp
Strand : +
Note : COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain

DNA sequence :
ATGACGGATAACACAGACAATTTACTCGGTGAAGCCAACGCCTTCATCGAAGTGCTGGAACAGGTCTCACAACTGGCGAA
GCTGAATAAGCCGGTTCTGGTCACCGGCGAACGCGGCAGCGGAAAGGAACTGATTGCGCATCGTCTGCATTATCTGTCGC
CCCGCTGGCAGGGGCCGTTCATTTCGCTCAACTGTGCGGCGCTCAATGAAAACCTGCTGGATTCCGAGTTGTTCGGCCAT
GAAGCTGGCGCGTTTACCGGCGCACAGAAACGTCATCTCGGACGCTTTGAACGTGCGGATGGCGGCACGTTATTTCTCGA
TGAGCTGGCGACAGCGCCCATGCTAGTGCAGGAAAAACTGCTGCGCGTGATTGAGTACGGTCATCTGGAGCGCGTCGGCG
GCAGCCAGCCGTTACAGGTGGATGTCCGGCTGGTGTGTGCGACCAACGATGATTTACCGGTGCTGGCCGCTGAAGGAAAA
TTTCGCGCCGACCTGCTGGACCGGCTGGCGTTTGATGTGGTGCAACTGCCGCCGCTGCGTGAACGCCAGCAGGACATCAT
GTTGCTGGCGGAACATTTCGCCATTCAGATGTGCCGCGAACTGTCTCTCCCGTTATTCCCCGGCTTTACCGACTATGCGC
GTCAGACGCTGATGGCCTACCGCTGGCCGGGCAATATCCGCGAGCTGAAAAACGTCGTCGAACGCTCGATGTACCGCCAT
GGTACCAGCGATTTTCCGCTCGATAATATTATCCTGAACCCGTTTGCGCAGCGCACTGCCACCGTGGAAACGGCTGACGT
CAGTCCACACGACACGCTGCCGACGTTACCGCTGGATCTTAAGCAATGGGTGACCGGACAGGAAAAAAATCTGATTGAGC
AGGCTTTACGGCAGGCACGCTTTAATCAGCGTAAAGCCGCAGAGTTGCTGAACGTGACTTATCATCAGTTGCGCGGAATG
TTGAAGAAACACGCAATTCAGGTCAATTCGCAGGAAGGGGCTGAATAA

Protein sequence :
MTDNTDNLLGEANAFIEVLEQVSQLAKLNKPVLVTGERGSGKELIAHRLHYLSPRWQGPFISLNCAALNENLLDSELFGH
EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPVLAAEGK
FRADLLDRLAFDVVQLPPLRERQQDIMLLAEHFAIQMCRELSLPLFPGFTDYARQTLMAYRWPGNIRELKNVVERSMYRH
GTSDFPLDNIILNPFAQRTATVETADVSPHDTLPTLPLDLKQWVTGQEKNLIEQALRQARFNQRKAAELLNVTYHQLRGM
LKKHAIQVNSQEGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpRS ABA47311.1 HrpRS Virulence S-PAI Protein 6e-34 41