Gene Information

Name : Q7S_01245 (Q7S_01245)
Accession : YP_005400083.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : Pili assembly chaperone, N-terminal protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 287744 - 288430 bp
Length : 687 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGGGTAAGTCAAAAATATTAACATTACTTTTCATTATAACTTCAGTAGTTACATCACAAATAACCTATGCCGGCGGAAT
TATTGTCGGACGGACACGCGTTATTTATGATGCAGATAAAAGGGAAGCTACCCTTTCCGTTAAAAATAATGCCGATAACA
ATCCTTTCCTCATACAATCGTGGGTTGATGCGGGGGGAGAAAAAACACGCGGTCCTTTTATTATCACCCCGCCACTATTT
CGACTGAATGCTCAACAGGAAAGTAACCTGCGCATTTCCTATAACGGCAGCGTCCTCCCGACAGACAGAGAGTCCGTTTT
CTATATCAATGTTAAAGCGATACCTTCAACGCCAAAAAATACAAAAAACGAACTTAAACTGGTGGTCAATACGCGGATAA
AGCTCTTTTACCGGCCAACAAAACTGCCCGGAAAATCGTTTGAAGCACCGAAGGCGCTCACTTTCTCCAGAAATAACGGG
CATCTCGTTATCAAGAATCAGAGCCCTTATCACGTTGTTTTCAGTTCACTCAGCATTGGCTCAACTTTTTTAAAAGAGGT
GGCCATGATTGCGCCATTGAGCGAGCTGGATGTCATTCTTCCCGCGAAAATCTCAGGCAACAGTGTGAAATGGGAAGCGA
TAAATGACTATGGCGGCACGACAGAACGATATGAGCAACCTCTGTAA

Protein sequence : 
MGKSKILTLLFIITSVVTSQITYAGGIIVGRTRVIYDADKREATLSVKNNADNNPFLIQSWVDAGGEKTRGPFIITPPLF
RLNAQQESNLRISYNGSVLPTDRESVFYINVKAIPSTPKNTKNELKLVVNTRIKLFYRPTKLPGKSFEAPKALTFSRNNG
HLVIKNQSPYHVVFSSLSIGSTFLKEVAMIAPLSELDVILPAKISGNSVKWEAINDYGGTTERYEQPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_01245 YP_005400083.1 Pili assembly chaperone, N-terminal protein VFG0445 Protein 1e-37 43