Gene Information

Name : Q7S_11970 (Q7S_11970)
Accession : YP_005402186.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2652714 - 2653808 bp
Length : 1095 bp
Strand : -
Note : COG1125 ABC-type proline/glycine betaine transport systems, ATPase components

DNA sequence :
ATGATTTCATTTGAGAGCATAAGCAAATTTTACGCAGATGGGACGGTGGCTGTAGACAGGCTGTCGTTCAGTGCGCCGAC
GGGAAAAATTACTATGCTGGTCGGGCCTTCGGGCTGCGGCAAAACCACTTCACTGCGCATGATCAACCGGTTAACCGAGC
CGTCTTCAGGCAACATTTTGCTGAACGGACAGCCGACCGCCGGAATGGATCTGGTTAAACTGCGCCGCAAAATAGGCTAT
GTGATCCAGAACGCCGGGCTGTTTCCGCACAAAACCGTGCAGGATAACATTGCGGTCACGGCGCTGCTCAACGGTGCGAC
ACGCACGGCAGCGCGTAAAAAAGCCCTCGAATTACTTGAAATGGTCGGGCTTTCGCTGACGATGGCGGAGCGCTATCCGT
GGCAGTTGTCCGGTGGTCAGCAACAAAGGGTCGGCGTGGCGCGTGCGCTGGCATCGGACCCGGAATTTATGCTGATGGAC
GAACCTTTCAGCGCCGTCGATCCGGTGGTGCGCGAACAGTTACAGGATGAGTTTTTAAGATTACAACGTGAAATCGGCAA
GACCATTATTATGGTCACGCACGATATTGATGAGGCGATGAAATTAGGCGACCAGGTTGCGGTTTTCCGCCCCGGTGGTC
GTCTGGCGCAAATCGCCTCACCGGTGAAATTACTTAATGAACCCGGGGATGCGTTTGTCGCTGACTTTATTGGCCGTGAC
CGCGGATACCGCAAACTTTCGTTCGATATGATCCCTGATAATATCAGCCTGACGAAAGAACCTGTGATCGTGCCGGGTAT
TTCCGTCAGCGAAGCCCGATCCCTTGCCGGAGAAAGTGCCTGGTTACTGGTGGTTGAAAATGAATGTCCGCTCGGCTGGT
ATGATGTGACACAAAATAAAACCACCGTGGACCCGGAAGATATTAATCTCGGCAGCACCTTTGCGCCGAAAAATGGCACG
CTGCGTCAGTTAATGGATTCGGTATTAAGTTCTCCCTGTCAGCGCGGTATCGTGGTTGATGAACAGCAGCGCTTTATGGG
TACGGCAAATATCGAACAGGTGTTTTCACTTTCTCATTCCCGTGCTGTGAGGTAA

Protein sequence :
MISFESISKFYADGTVAVDRLSFSAPTGKITMLVGPSGCGKTTSLRMINRLTEPSSGNILLNGQPTAGMDLVKLRRKIGY
VIQNAGLFPHKTVQDNIAVTALLNGATRTAARKKALELLEMVGLSLTMAERYPWQLSGGQQQRVGVARALASDPEFMLMD
EPFSAVDPVVREQLQDEFLRLQREIGKTIIMVTHDIDEAMKLGDQVAVFRPGGRLAQIASPVKLLNEPGDAFVADFIGRD
RGYRKLSFDMIPDNISLTKEPVIVPGISVSEARSLAGESAWLLVVENECPLGWYDVTQNKTTVDPEDINLGSTFAPKNGT
LRQLMDSVLSSPCQRGIVVDEQQRFMGTANIEQVFSLSHSRAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-59 52
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-59 52