Gene Information

Name : tpx (Q7S_10455)
Accession : YP_005401892.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2300630 - 2301133 bp
Length : 504 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence : 
ATGACCCAGACAGTACACTTTCAAAGCAACCCGGTTAGCGTTGCAGGCAAAATCCCTCAGAAAGGCGATGTTGCTAAGCC
TTTCACCCTGGTCGCTAAAGATCTTGCTGATGTCAGCCTGAGCAGCTTCGCGGGCAAACGTAAAGTCCTGAACATTTTCC
CAAGCATCGATACCGGCGTTTGCGCCACGTCCGTCCGCAAATTCAACCAACTGGCGGCTGACATCGACAACACTGTGGTG
CTGTGCATTTCTGCTGATCTGCCCTTCGCACAGTCCCGTTTCTGCGGCGCGGAAGGCCTGTCCAACGTGATTACCCTGTC
CACCCTGCGTGGCGGTGATTTCAAATCCGAATACGGCGTGGGCATTACCGATGGCGCATTGTCCGGTCTGACTGCCCGTG
CGGTTGTGGTGCTGGATGGTCAGGATAACGTGTTGTACAGCGAGCTGGTGAATGAAATCACCACTGAGCCTGACTATGAA
TCTGCGCTGGCTGTGCTGAAATAA

Protein sequence : 
MTQTVHFQSNPVSVAGKIPQKGDVAKPFTLVAKDLADVSLSSFAGKRKVLNIFPSIDTGVCATSVRKFNQLAADIDNTVV
LCISADLPFAQSRFCGAEGLSNVITLSTLRGGDFKSEYGVGITDGALSGLTARAVVVLDGQDNVLYSELVNEITTEPDYE
SALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 50
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 9e-34 50
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-34 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_005401892.1 lipid hydroperoxide peroxidase VFG0087 Protein 2e-34 50