Gene Information

Name : Q7S_01065 (Q7S_01065)
Accession : YP_005400047.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Resistance
Product : Cys/Met metabolism pyridoxal-phosphate-dependent protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 243967 - 245157 bp
Length : 1191 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGAAAAAACTGAACACTTCACGTTCTTTAGGGATGCGTACGCTCGCCGTTCATGGCGGACAGCAGCCCGATGCCCTGAC
CGGCGCGATTGCAACACCTATCACCGCCGCATCGGCATTTTCATATCCGGATTTTGACAGCGGCGCACGCCGTTTCAGTG
GTGAAGAACCGGGTTATATTTACAGCCGTTTCGCCAATCCGACGGTGGCCGTTTTTGAACAGAAACTGGCGGCGCTCGAA
GGTGCAGAAACCGCCGTTGCCTGCGCGAGTGGCATGGCAGCGATCAGCGCCACGTTGTTTGCCCTGCTGGTTCCCGGCGA
TGAAATCATTCATATCGGCACGCTGTATGGCGGCACTGAAGGCGTGGTGCGTAACCTGCTGCCACGTTATGGCATCAAAC
CGGTTCACGTTACCCATGTGAGCGAACTGGAAGCGGCATTCACAAAAAACACCAAAGTGGTGCTGGTGGAAACCCCGGCT
AACCCGGGACTGGATATCGCCGATCTGGCTGAAGTCGCCCGTCTGTCGAAAGCCGCCGGTGCAGTCAGTGTGGCGGATAA
TACTTTTGCCACACCGTACCTGACGCGCCCGCTGGAACTGGGCATTGATATCGTTCTGCATTCCGCGACCAAATACATCA
GCGGCCACGGCGATGCGACCGGTGGCGTAGTGGCCGGTTCGGCGGCATTAATCACGCCAATCCGCACCCTGAGTCTGAAG
CAGTTCGGTGGCAACCTGAGCCCGTTCGAAGCCAGCCTGCTGATCCGCGGCCTGAAAACTCTGCCGCTGCGCGTCGAAGC
CAGTTCGCTGAGCGCACAGGCGGTGGCGGAATTCCTCGACGGCCACAGCGCGGTAGACACCGTGTTCTATCCGGGGCTGA
AGCAGCATCCGGGACATGCCACCGCCTCAAAACAAATGAAACTGTTTGGCGGGATTATGGCCATTGAGCTGAAAGGCGGC
CTCAACGCCGCACGGACGTTCCTCGATAAGCTGAGCATCATCACGCAGGCGGTATCGCTCGGCGACACCGATTCGCTGGC
CTGCCATCCGGCATCGACAACGCACAGCGCCGTCGCGCCGGAAGTTCGCCGCCAGAGCGGTATCACCGACGGACTGGTGC
GCATCAGCATCGGTATCGAAGATACCGAAGACCTGATTGCTGATCTGCAACAGGCGCTGGAAGGGCTTTAA

Protein sequence :
MKKLNTSRSLGMRTLAVHGGQQPDALTGAIATPITAASAFSYPDFDSGARRFSGEEPGYIYSRFANPTVAVFEQKLAALE
GAETAVACASGMAAISATLFALLVPGDEIIHIGTLYGGTEGVVRNLLPRYGIKPVHVTHVSELEAAFTKNTKVVLVETPA
NPGLDIADLAEVARLSKAAGAVSVADNTFATPYLTRPLELGIDIVLHSATKYISGHGDATGGVVAGSAALITPIRTLSLK
QFGGNLSPFEASLLIRGLKTLPLRVEASSLSAQAVAEFLDGHSAVDTVFYPGLKQHPGHATASKQMKLFGGIMAIELKGG
LNAARTFLDKLSIITQAVSLGDTDSLACHPASTTHSAVAPEVRRQSGITDGLVRISIGIEDTEDLIADLQQALEGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-58 43
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-57 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_01065 YP_005400047.1 Cys/Met metabolism pyridoxal-phosphate-dependent protein BAC0207 Protein 1e-83 49