Gene Information

Name : Q7S_09555 (Q7S_09555)
Accession : YP_005401712.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Resistance
Product : transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2082405 - 2083052 bp
Length : 648 bp
Strand : -
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGCTTTCCACCACCGTATTTCTGGCGGCGGCCATGCAGTGCGCCGCCAGCATTCACCCGTCTACGGCACTTGATGTGGC
ACGGGTCGAATCCGGTTTGAATCCGTATGCCATCGCTGAAATTCTGCCCGGTGGCAAAGGCGTGACTTCACATTTCCCCG
CCAGCAAGGATGAGGCCGTCAGCATCACCAGACAGCTGACGGCACAGGGCCGACGCTATTCGGTCGGGCTGATGCAAATC
ACCAGCACCAATTTCCGTCATTACCGCGTGAGTGCCCGCGACCTTCTTGACCCCTGTACCAACCTGTCCGTTTTTGAGCG
CATCCTTACCGACTGCTACCGCCGCGGCGGTTCCCTCAAGCGTGCGCTCAGTTGCTACTACTCGGGAAATTTCACGACCG
GCCAGCAAGCGGAATCCGCGTTTAACCAGACCAGCTACATCCAGCGCATCGGCTACGCCGTACCGTCAACGCGGGAAGAC
CGGCAGCGACCTTCCGCCGAAAAGCTCGTGTCGGAAATCCATTACCCCACCGCCGTCATGCGTGGCGAGCTTACCGATAA
CGCCACGCCAGTTCTGACATCCCTGCGCTACCCCAATGCCCTAATACGCGGCGCGTTACCTATTCCCAGCCCCCAGGAGG
AACAATGA

Protein sequence :
MLSTTVFLAAAMQCAASIHPSTALDVARVESGLNPYAIAEILPGGKGVTSHFPASKDEAVSITRQLTAQGRRYSVGLMQI
TSTNFRHYRVSARDLLDPCTNLSVFERILTDCYRRGGSLKRALSCYYSGNFTTGQQAESAFNQTSYIQRIGYAVPSTRED
RQRPSAEKLVSEIHYPTAVMRGELTDNATPVLTSLRYPNALIRGALPIPSPQEEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70283.1 Pilx1/VirB1-like protein Not tested HPI Protein 1e-56 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_09555 YP_005401712.1 transglycosylase BAC0396 Protein 3e-46 50