Gene Information

Name : Q7S_07975 (Q7S_07975)
Accession : YP_005401404.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1749826 - 1750521 bp
Length : 696 bp
Strand : -
Note : COG3842 ABC-type spermidine/putrescine transport systems, ATPase components

DNA sequence :
ATGTCAGAAATTGCGTTACGCCTTCAGGATGTGCATGTGGCTTATGACAACGGCCAGCAACCGGTATTGAAAGGATTTTC
AATGTCAGTACGTGAGGGGGAGCTTGCTTGCTTATTGGGAGCCTCGGGTTGCGGGAAAACCACGGTGCTGCGTGCCGTTG
CCGGGTTTGAACGGCTGCAAAGCGGTGAGATCTATGTTTCACAGCATCGCGTTGCCGGGCCAGGTCTTCATCTGCCGCCA
GAAAAACGTCATGTCGGCATGGTCTTTCAGGAATATGCGTTATTCCCACACCTGACAGCTCAACAGAATGTCGCGTTTGG
CCTGCGCAGGATACCGCGTGAGGAGCAACAAGCCAGAGTGACGGCGCTGTTAAGACTGGTGGAATTGCATAGCCATGCCA
GCCGCTATCCCCACGAACTCTCCGGCGGGCAACAACAGCGCATTGCGTTGGCTCGCGCGCTGGCACCGAATCCAGAGATC
CTATTGCTGGATGAGCCCTTTTCCAGTCTGGATAAAAAAACGCGCGAGCGACTCGGCGGCGAGGTGCGCGATATTCTGCG
TGAAGCCGGGCAAACGGCACTTCTGGTGACGCACAGTGAGCAAGAAGCGCAATTGATGGCAGATCATATTGGTTATGTGC
AACAGGGTGAATATCACAAAATAAAGGTGGACGATTCGAATTACGCGAACATTTAG

Protein sequence :
MSEIALRLQDVHVAYDNGQQPVLKGFSMSVREGELACLLGASGCGKTTVLRAVAGFERLQSGEIYVSQHRVAGPGLHLPP
EKRHVGMVFQEYALFPHLTAQQNVAFGLRRIPREEQQARVTALLRLVELHSHASRYPHELSGGQQQRIALARALAPNPEI
LLLDEPFSSLDKKTRERLGGEVRDILREAGQTALLVTHSEQEAQLMADHIGYVQQGEYHKIKVDDSNYANI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_07975 YP_005401404.1 ABC transporter BAC0600 Protein 3e-24 45