Gene Information

Name : Q7S_07130 (Q7S_07130)
Accession : YP_005401237.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1569440 - 1570285 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAGAAAGTATCGAAATGGTTTCGAATCGGCGTTGAGGGTGATACCTGCGACGGCCGCAATATTGAGGCAAGCGA
CATTCAGCAAATGGCCGCAGCGTTTGATCCGCGCGTCTACGGTTGCCGCATCAATCTGGAGCACATCAGAGGCTTATTAC
CCAGCGGTGACTTTAAGCGTCTCGGTGATGTCGTCGAACTGAAAGGCGAGAAAATTGATGATGATTCAGCCCTGAAAGGT
AAATGGGCGCTGTTTGCCAAAATCACCCCGACTGACGAGCTGGCCGCAATGGTGAAAGCGGGGCAGAAAATTTATACCTC
CATGGAAATTCGCCCGAATTTCGCCAACACCGGTAAAGCCTATCTGGTCGGTCTGGCCGTGACTGATGACCCCGCCAGCC
TTGGAACGGAAATGCTCGAATTCAGCGCCCGCGCTAAGGTCAACCCGTTTGCCGGTAAGAAAGACCAGCCGGATGATTTG
TTCTCCGTGGCCACCATTGCCGAGCTGGATTTCGAAGATCTGCCTGACAACCTGCTTACCAGCCTGACTGAAAAGATCAA
AGGGATGTTCAGCACCAAACAGACCAGCGATGACGCACGTTTTTCTGATGTGCAGGGCGCGATCACGGTCGTGGCCGAGG
AATTACAAATCGCCGGTGAAACCACCGCAAAACGCTTCTCTGAACTGGAGCAGGAAATTACCGCGCTGAAAGGGCAGGTG
AAAACCAGCGATGCGGCGCTTAGCTCGTTAAAAACTTCCCTCGATAGCACCGAAAGTTTCAAACAACCGAAACGCCCGGT
CTCTCCGGGTGGCAACGGTGAAAGCACCTTTTTGACGAACTGCTAA

Protein sequence :
MAKKVSKWFRIGVEGDTCDGRNIEASDIQQMAAAFDPRVYGCRINLEHIRGLLPSGDFKRLGDVVELKGEKIDDDSALKG
KWALFAKITPTDELAAMVKAGQKIYTSMEIRPNFANTGKAYLVGLAVTDDPASLGTEMLEFSARAKVNPFAGKKDQPDDL
FSVATIAELDFEDLPDNLLTSLTEKIKGMFSTKQTSDDARFSDVQGAITVVAEELQIAGETTAKRFSELEQEITALKGQV
KTSDAALSSLKTSLDSTESFKQPKRPVSPGGNGESTFLTNC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 2e-54 47
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 2e-54 47
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-46 45