Gene Information

Name : Q7S_06600 (Q7S_06600)
Accession : YP_005401131.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1447087 - 1447752 bp
Length : 666 bp
Strand : -
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATAAAAATCGAAAACCTGACAAAATCCTACCGCACACCGAAAGGCCGCCATTACGTTTTTAAAGATCTCAATGTTGA
GCTGCCTTCAGGTAAAAGCGTGGCGTTGATTGGCCGCAATGGCGCGGGTAAATCAACGTTGTTACGCGTCATCGGCGGCA
TTGACCGCCCGGATTCCGGCAAAATTCACACGGAGAAAACCATTTCCTGGCCGGTTGGCCTGGCCGGCGGATTTCAGGGA
AGCCTGACCGGACGTGAAAATGTAAAATTCGTCGCCCGCCTCTATTCCACACCAGATCAGTTACGTGAAAAAGTCGCCTT
TGTCGAAGAGTTTGCCGAACTGGGCAAATACTTTGATATGCCGATTAAAACCTATTCTTCCGGTATGAAATCCCGTCTGG
GTTTTGGCCTGAGCATGGCATTTAAATTTGATTATTATCTTGTCGATGAAGTCACCGCAGTCGGCGATGCCAGATTTAAA
CAAAAATGCGCAGACTTATTCAAAGCACGACATGAGGAAGCCAGCTTTCTGATGGTTTCACATAGCCTCGGATCACTGAA
AGAGTTTTGCGATGTGGCTTTGTTTATTGGAAGGGATAACAAAGTGAAGTACTTCGAATCGGTTGATGAAGCTATTACCA
CTTATAAAAATGATGAAGGGATATGA

Protein sequence : 
MIKIENLTKSYRTPKGRHYVFKDLNVELPSGKSVALIGRNGAGKSTLLRVIGGIDRPDSGKIHTEKTISWPVGLAGGFQG
SLTGRENVKFVARLYSTPDQLREKVAFVEEFAELGKYFDMPIKTYSSGMKSRLGFGLSMAFKFDYYLVDEVTAVGDARFK
QKCADLFKARHEEASFLMVSHSLGSLKEFCDVALFIGRDNKVKYFESVDEAITTYKNDEGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 3e-80 75
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 2e-78 73
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-45 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_06600 YP_005401131.1 ABC transporter VFG1449 Protein 8e-79 73
Q7S_06600 YP_005401131.1 ABC transporter VFG0696 Protein 8e-47 45
Q7S_06600 YP_005401131.1 ABC transporter VFG0258 Protein 1e-45 45
Q7S_06600 YP_005401131.1 ABC transporter VFG2563 Protein 3e-44 43