Gene Information

Name : Q7S_06255 (Q7S_06255)
Accession : YP_005401064.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1369073 - 1369459 bp
Length : 387 bp
Strand : -
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGGCTCAAGACATTCATATCGCTATCGTCTGCGCACTCAGCAAATGGATTGAAGGCCATCTTGGTCGTGTGATCCATCT
TGAAGAACTGGCTGAGTATTCAGGCTATTCGCTCTGGCACATGCAAAAACTGTTCAAAGAATCGACAGGCATTTCTCTGG
GGAAGTACATCAGGGAACGCCGTCTGGCGAGTGCTGTTTATCAGCTGAGCAGCAGTGAAACCCCGATTTTTGACATTGCT
ATGGATTTCGGTTTTGGTTCGCAATCGCATTTCACCTACATGTTCCGCAAGCGTTTCAACATAACGCCACATGAATTCCG
CCAGAACCCTGACATCAAACTTGATGTCTCTCCCCCGCTGCATCTCATCCATCAGAAATCTGCCTGA

Protein sequence : 
MAQDIHIAIVCALSKWIEGHLGRVIHLEELAEYSGYSLWHMQKLFKESTGISLGKYIRERRLASAVYQLSSSETPIFDIA
MDFGFGSQSHFTYMFRKRFNITPHEFRQNPDIKLDVSPPLHLIHQKSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 6e-20 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 8e-18 45
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 2e-20 43
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 2e-20 43
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 4e-20 43
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator BAC0371 Protein 2e-20 43
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 1e-19 42
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_06255 YP_005401064.1 AraC family transcriptional regulator VFG0585 Protein 2e-20 43