Gene Information

Name : yjcC (UMN798_4622)
Accession : YP_005399531.1
Strain : Salmonella enterica 798
Genome accession: NC_017046
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4522403 - 4523935 bp
Length : 1533 bp
Strand : +
Note : -

DNA sequence :
TTGCTGGCGATCTGGTTTGCTCATATCCGGGCAGTCTCTGAAACCAGAAATCAGTTACATTCATTTGCGCAGTTGGTATT
AGATAAAACGGAGCGGGTTATCCTGCAAGCAGATTTAGCCCGCGATGCCGCTGAACAATATCAGGGGCAAGCCTGTACGC
CAGCCCATCAACAGCGAATGCTGAATATTATCCGCGGTCGTTTGTACATTAATGAGTTGATTTATGCTAAGGGCCAGCGT
TTTCTATGCTCTACGGTTATGACGCCAACAAGTCCTTATTTTATTCCCCGCGCTGACTATAAACGAAAGCCTGACATCGC
TATTTATTACTATCGTGATACGCCTTTTTTCAACGGTTATAAAATGACATATATGCAGCGGGGAAACTATGTCGCGGTTA
TCAATCCCTTATCTTATAGCGAGGTGATGTCAGACGATCCGGCGTTGGCCTGGGGAATGTATGATACGGTGACCAACACC
TTTTTCTCCCTGAGTGAACAGGCGCAGGCTGATCAGCTATTACCTTTGGTACGACGGAGTGAACCTGTGTTCCAACAGGG
TGAGCGTTTTTATACTCTGGTTAAATCAGCAAAACGACCGGTTGCCGCGATTGTGTCAACCTCAAAGCAACGCTTTTACC
AGAACCTCTTTCATCAGCTTACGTTAACGCTACCGTTAGGGATCATCTGTAGCATTATCATCTTATTTATGTGGTCACGA
TCCCGGCAGGCATATTACTCACCGCGTCGATTGCTGCAACGGGCCATTACCAGGCACCAGCTTTGCCTTCATTATCAGCC
GATCATTGATATCCGAAACGGGACATGTGTAGGTGCCGAAGCGCTATTGCGTTGGCCGGGCTATCACGGTCCGGTGATGA
GCCCGTGCGAATTTATTCCGCTGGCGGAAAAAGAGGGGATGATTGAGCAGATCACCGATTATGTCGTCGAAGAGGTATTT
AATGATTTAGGTGGTTTTCTGGCCGCGCACCCGCATCTTTATGTCTCTATCAATCTCGCTGCCGCCGATTTTCTCTCTTC
CCGACTAATTGTGATGATTCATGAAAAAACGCGTCAGCATTCAGTGCTTGCGCAACAGATAAAGGTTGAAGTGACTGAGC
GCGGATTTATTGATGTGCCTAAAATGACGCCGATTATTCAGGCGTTTCGCCAGGCGGGATACGAGGTGGCAATTGATGAC
TTTGGTACCGGCTATTCGAACTTGCATAACCTGTACTCATTAAATATCGACCTTTTAAAAATTGATAAATCTTTTGTCGA
CACGCTAACCACTAATAGCGCCAGCCATTTGATTGTGGAACATATTATTGAAATGGCGCAAAGTTTGCGGCTAAAAATCA
TTGCTGAGGGGGTTGAAACGGCTGAACAGGTTAGCTGGTTGCTAAAACGCGGCGTTCAGTATTGTCAGGGATGGCACTTT
GCGAAGGCGTTACCACCGCAGGAATTCATCGCCTGGCTACAACAAACGCCCGCGCCTCTGACGATACGCGGGCAGACGCC
CTACAGGCGGTGA

Protein sequence :
MLAIWFAHIRAVSETRNQLHSFAQLVLDKTERVILQADLARDAAEQYQGQACTPAHQQRMLNIIRGRLYINELIYAKGQR
FLCSTVMTPTSPYFIPRADYKRKPDIAIYYYRDTPFFNGYKMTYMQRGNYVAVINPLSYSEVMSDDPALAWGMYDTVTNT
FFSLSEQAQADQLLPLVRRSEPVFQQGERFYTLVKSAKRPVAAIVSTSKQRFYQNLFHQLTLTLPLGIICSIIILFMWSR
SRQAYYSPRRLLQRAITRHQLCLHYQPIIDIRNGTCVGAEALLRWPGYHGPVMSPCEFIPLAEKEGMIEQITDYVVEEVF
NDLGGFLAAHPHLYVSINLAAADFLSSRLIVMIHEKTRQHSVLAQQIKVEVTERGFIDVPKMTPIIQAFRQAGYEVAIDD
FGTGYSNLHNLYSLNIDLLKIDKSFVDTLTTNSASHLIVEHIIEMAQSLRLKIIAEGVETAEQVSWLLKRGVQYCQGWHF
AKALPPQEFIAWLQQTPAPLTIRGQTPYRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yjcC YP_219130.1 diguanylate cyclase/phosphodiesterase Not tested SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjcC YP_005399531.1 hypothetical protein VFG0584 Protein 0.0 99