Gene Information

Name : UMN798_0357 (UMN798_0357)
Accession : YP_005395826.1
Strain : Salmonella enterica 798
Genome accession: NC_017046
Putative virulence/resistance : Unknown
Product : IS3 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 368672 - 369472 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence :
ATGTTGGCTTCCACACCACCGACTTCAACTGGGGTATTTAACCGGGCGCTTAGCTCGCTGGCGATAGCCTGCATCTGTAA
GCGGTACGTCTGGCATCAGCGTCGTCATCAGATAAACCGGCGTCAGCGGTTCCACCTTGTCTGTGATAACGTCTTCCGGG
AAGCATTCAGTGACGCAAAACAACGCTATGGTGCGCCACGCCTGACGGATGAGCTTCGTGCTCAGGGTTACCAGTTCAAC
GTGAAAACCGTGGCGGCCAGCCTGCGTCGGCAGGGGCTGCGGGCGAAAGCCTCGCGCCGGTTCCGTCCGGTCAGTTACCG
CAAACATGGTCTGCCAGTCTCAGAGAATCTGCTGAAGCAGGACTTTTACGCCAGCGGCCCGAATCAGAAGTGGGTGGGTG
ACATCACGTATCTTCGCACTGGTGAAGGCTGGCTTTATCTGGCCGTGGTTATCGATCTGTGGTCGCGGTCAGTCATTGGC
TGGTCGATGTCTTCGCGGATGACAGCACAGCTTGCCTGCGATGCGTTACAGATGGCGCTGTGGCGGCGTAAATGTCCGGA
AAATGTCATCGTGCATACAGACAGAGGCGGTCAGTACTGTTCAACGGATTATCAGAGCTTACTGAAACGCCATAATCTGC
GGGGAAGTATGAGCGCCAGAGGTTGTTGTTACGACAATGCCTGTGCGGAAAGCTTCTTCCATACGCTGAAGGTGGAATGT
ATCCACGGAGAGGACTTTGTCAGCCGGGAAATAATGCGGACAGCAGTGTTTAATTATAGTGAGTGTGATTACAATCGGTA
G

Protein sequence :
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFN
VKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIG
WSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVEC
IHGEDFVSREIMRTAVFNYSECDYNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-89 87
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-89 87
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 5e-89 87
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-84 80
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-38 48
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-38 48
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-38 48
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-35 43
unnamed AAF09022.1 unknown Not tested SHI-O Protein 1e-35 43
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-35 43
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-35 43
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-35 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-35 43
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-35 43
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-35 43
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN798_0357 YP_005395826.1 IS3 transposase VFG1631 Protein 1e-84 80
UMN798_0357 YP_005395826.1 IS3 transposase VFG1706 Protein 7e-36 43