|
Name : gabD (UMN798_3030) Accession : YP_005398160.1 Strain : Salmonella enterica 798 Genome accession: NC_017046 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2961450 - 2962898 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGCAACTTAACGACTCTACCCTGTTCCGCCAGCAGGCCTTTATCGATGGCGACTGGCGCGACGCGCGCGGCGGCGATGT CATCCCCGTGAGCAACCCCGCCAACGGGAAACCGCTTGGCAATGTGCCCAAAATGGGGGCGGAAGAGACGCGCGACGCCA TCAACGCCGCCAATCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAGCGAGCCAATATCCTGCGTCGCTGGTTC AATCTGATGATGGAACATCAGGACGATTTGGCGCGTCTGATGACGCTGGAACAGGGTAAACCGCTGGCGGAAGCGAAAGG CGAAATTAGCTACGCCGCCTCGTTTATTGAATGGTTCGCCGAAGAGGGGAAGCGTATCTATGGCGACACGATTCCAGGCC ATCAGGCCGATAAACGGCTGCTGGTGATTAAACAGCCCATCGGCGTCACCGCCGCGATTACCCCGTGGAACTTTCCCTCG GCAATGATCACCCGTAAAGCCGGCCCCGCGCTGGCCGCAGGCTGCACAATGGTACTCAAACCCGCCAGCCAGACGCCGTT TTCCGCGCTGGCGCTGGCGGAACTGGCCCAGCGCGCCGGAATTCCCGCAGGCGTATTTAACGTCGTTACCGGTTCGGCAG GCGATATCGGCGGCGAGCTGACCAGCAACCCGCTGGTACGCAAACTGTCGTTTACCGGCTCGACGGAGATTGGCCGCCAG CTAATGGAACAATGCGCCAAAGACATTAAAAAAGTGTCGCTGGAATTGGGCGGCAATGCGCCGTTTATCGTCTTTGACGA TGCCGATCTGGATAAAGCCGTCGAAGGCGCGCTGGCTTCGAAGTTTCGCAACGCCGGGCAGACCTGTGTCTGCGCCAATA GATTGTATGTTCAGGACGGCGTTTACGATCGTTTTGCGGAAAAACTCAACCAGGCGGTAAATAAGCTCGCGGTCGGTGAC GGCCTGCAAGCCGACGTCGCTATCGGGCCGCTGATTGATGAAAAAGCCGTGGCGAAAGTCCAGGAACATATCGCCGATGC GCTGGAAAAAGGCGCCCGCGTCATTACGGGCGGTGAAGCGCACAAATTGGGCGGCAACTTCTTTCAACCGACCATTCTGG CGGATGTTCCTGATAACGCGAAAGTCGCCAAAGAAGAGACATTCGGGCCGCTCGCGCCTCTGTTCCGCTTCAGCGACGAG GCGGACGTCATCAGGCAGGCTAACGATACCGAGTTCGGCCTGGCAGCCTATTTTTATGCACGCGATTTAAGCCGCGTTTT CCGCGTCGGCGAAGCGCTGGAATACGGCATCGTCGGTATTAATACCGGCATTATCTCCAACGAAGTCGCGCCTTTCGGCG GCATTAAGGCCTCCGGATTAGGCCGAGAAGGTTCCAAATACGGCATCGAAGATTATTTAGAAATCAAATATATGTGCATC GGCCTTTAA Protein sequence : MQLNDSTLFRQQAFIDGDWRDARGGDVIPVSNPANGKPLGNVPKMGAEETRDAINAANRALPAWRALTAKERANILRRWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAQRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLNQAVNKLAVGD GLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDE ADVIRQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-160 | 67 |
