Gene Information

Name : sseB (UMN798_1455)
Accession : YP_005396796.1
Strain : Salmonella enterica 798
Genome accession: NC_017046
Putative virulence/resistance : Virulence
Product : pathogenicity island effector effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1440899 - 1441447 bp
Length : 549 bp
Strand : +
Note : -

DNA sequence : 
GTGTTTAAAAATAGCTTCGGCGTCAGCAACGCTGATACCGGGAGCCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGA
AGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTCAGGCTATCGCAAATAATAAATTTATTGAAGTCCAGAAGAACG
CTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAGATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAA
ACCAAAGAGGAGGTGCCTGAGGATGTAATTAAATACATGCGTGATAATGGTATTCTCATCGATGGTATGACCATTGATGA
TTATATGGCTAAATATGGCGATCATGGGAAGCTGGATAAAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACG
CCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATAACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACC
CAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTCCAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAK
TKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQITIQKMSQELNAVLT
QLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB CAA12185.1 SseB Virulence SPI-2 Protein 7e-80 99
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 1e-79 99
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-79 99
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 1e-79 99
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 7e-80 99
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 4e-79 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseB YP_005396796.1 pathogenicity island effector effector protein VFG0499 Protein 3e-80 99