Gene Information

Name : copS (UMN798_1136)
Accession : YP_005396510.1
Strain : Salmonella enterica 798
Genome accession: NC_017046
Putative virulence/resistance : Virulence
Product : histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1138859 - 1140208 bp
Length : 1350 bp
Strand : -
Note : -

DNA sequence :
ATGACGCTGCGCCTGACAATTTCTTTTATCGCCATCCTTATCCTCGCCTGTACCGGCATTAGCTGGACGCTCTATAACGC
GCTGAGCAAAGAATTAACGTATCGGGATGATATGACGCTAATAAATCGGGCGGCGCAAATGCAGCAACTGTTACTGGATG
GCGCCAGGCCGGAAAATCTGCCGCTCTATTTCAATCGGATGGTGGATACGAAGCAGGACATCTTATTGATCCATTCAGCA
ACAGGCCACAATGTTGCGATTAATCATAGCGGCATCCCCGACCAACGCTTTAACGAGATTCCGCTGACTAAAAACATCAC
CCGCGAAACCTTATTTCGCCAGGCGGTACAAGGCACGGAACTGACCGCGGTACGCGTAAGCGCCAGAAGCGGCGATGACC
CGCTGACCCTTACTATTGCCAGGCTGGCGACGGAAAGGCGGCAAATGCTGGCGCAATATCGCCGCAACAGTTTGCTGATG
AGCCTTATCGCGATCCTCGTCTGTTCGGCGCTCAGTCCATTAGTCATCAGAAACGGGCTGCGGGCCATTACGTCGCTCAG
CCGACTCACCGCGGCGACAGATAGCGGCACACTTCGCCAGCCGTTGGCGGAACAGGCGTTACCCGTTGAGCTCAGGCCGC
TTGGACAAGCGCTAAATACCATGCGCCAGAAGCTTTCCGACGATTTTGAACGCCTGAACCAATTTGCCGACGATCTGGCG
CATGAGCTGCGCACGCCGGTTAATATTTTACTGGGGAAGAATCAGGTGATGCTGAGTCAGGAACGCAGCGCCGAAGAGTA
TCAACAAGCCCTTGTCGATAATATTGAAGAGCTGGAGGGACTGTCGCGACTGACAGAAAATATTCTCTTTCTGGCACGCG
CGGAGCACCAGAATATAGCGGTAAAAAAACAGCCTGTTTCGCTCAATGCGCTGGTCGAAAATATGCTGGATTATCTTAGC
CCCCTTGCCGAGGAGAAGCGCATCTGTTTTATAAATCAATGTCAGGGAACGGTATGGGCTGACGAAATATTATTACAAAG
AGTGCTCTCAAACCTGCTGACGAATGCCATCCGTTATTCTGATGAAAACGCCGTGATACGTATTGAAAGCGCTTATGATG
ATAACGTTGCAGAAATTCGGGTCGCTAATCCAGGCAGCCACCCCGCCGATGCGGATAAGCTTTTCCGGCGTTTTTGGCGA
GGAGATAATGCCCGCCACACTGCCGGTTTCGGCCTGGGGTTATCGTTAGTTAACGCGATTGCTCTATTACACGGTGGCTC
GGCATCTTACCGCTATGCCGATGAACATAATATCTTTTCGGTTCGTCTGCCTGATAGTGGTGATAGCTAA

Protein sequence :
MTLRLTISFIAILILACTGISWTLYNALSKELTYRDDMTLINRAAQMQQLLLDGARPENLPLYFNRMVDTKQDILLIHSA
TGHNVAINHSGIPDQRFNEIPLTKNITRETLFRQAVQGTELTAVRVSARSGDDPLTLTIARLATERRQMLAQYRRNSLLM
SLIAILVCSALSPLVIRNGLRAITSLSRLTAATDSGTLRQPLAEQALPVELRPLGQALNTMRQKLSDDFERLNQFADDLA
HELRTPVNILLGKNQVMLSQERSAEEYQQALVDNIEELEGLSRLTENILFLARAEHQNIAVKKQPVSLNALVENMLDYLS
PLAEEKRICFINQCQGTVWADEILLQRVLSNLLTNAIRYSDENAVIRIESAYDDNVAEIRVANPGSHPADADKLFRRFWR
GDNARHTAGFGLGLSLVNAIALLHGGSASYRYADEHNIFSVRLPDSGDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copS NP_460068.1 copper resistance protein Not tested SPI-5 Protein 0.0 100
copS AAC33720.1 histidine kinase Not tested SPI-5 Protein 0.0 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
copS YP_005396510.1 histidine kinase VFG0595 Protein 0.0 100