|
Name : RA0C_0998 (RA0C_0998) Accession : YP_005394474.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_017045 Putative virulence/resistance : Unknown Product : polysaccharide biosynthesis protein capd Function : - COG functional category : - COG ID : - EC number : - Position : 978424 - 980349 bp Length : 1926 bp Strand : - Note : - DNA sequence : ATGAACTTTAGTGAACTGAAAAATAAGATCTACGGAGGGGATAATATGATTAGTCTTTCTAATATTAGGTATTTGCCTAG ATGGATGGTACTTCTCATAGATGTTTTGTTTTTGATAGTTTCGCTTATGTTGTCCTATGGGGTGGTGGGTAAACTGTCTT CTGTAAGTTATCCCTATGTACTTAGTATTTACCAGAAGTATGCGGTTGTCTTAGGTGTAAATATCTTTTTTATGTTCTTG TTTCGTACTTACTCGGGGATTATTAGACATTCCACCTTTGTAGATTTATCTAAAATTTTATTAGCTAGTTTTTGCACAGT TTTTACTTTAGGTACAGTTACTTACATATATTTTTTCTTTTTTAAACAGAAATTACTACTGTTTCCCATCCTTCTGATAT ATTTCTGTATTTCTTTTACGGTTCTCTTTGTTTTTAGGTTGGTAGTGAAGGAAATTTTTCAATGGGCAAAAGAATACAGG AGAAGCTACTTAAGAAAAAAAATATTACTATTGGGAATAGGAGAAGAGTCGGTTGCTATTGCAAAAGCGGTGATGGGTAA TCCTTTTTTACCATACGAGGTCGTCGGGTTTATTACTGCTCGAAAGGATTCAAGGAAAGCCAAACTCTTGGGGAAGAGAA TTTATACCAGAGATTTTTTAGAAAAGACTACCAGAGAATATTTAGGTATAGATGGAGTTTTAATTGGTAGTAATACAGCC TCAATAGAGGAGATTGCAGAATGGGTTAATTTGTTTTTAGAGAAAGATTTAAAGGTATTTAAATCTCCGACCGTTCAAAA GTTGAGAAATGATGGGAGTAATATTAAAAATTTTCAAATAGAAGATTTACTTAATAGAAAGCCTATCGTTATAGAAAATG AGGAAGTAAAAAAGAGGCATCATCAAAAATCGGTTTTAGTAACAGGAGGAGCAGGTTCTATAGGGAGTGAAATAGTAAGG CAAGTAGCACAGTTTGAACCTTCGTTAATAGTTGTTCTAGACCAAGCGGAGACTCCTTTACATGAGATACAGTTGGAGGT GGAGGAAAACTACCCTGATATCAAGTTTGAATTTATACTGGCTGATATAACTAATAAGGAAAGATTAGAGTCGGTATTTA AAGAATATAATTTTTCTATGGTGTACCATGCGGCCGCCTATAAGCATGTTCCTTTGATAGAAAACAATCCGCATGAAGCC GCTCTAGTTAATATTCAAGGAAGTAAGAACTTGGCACTTTTGTCTAGTCGTTTTAAAGTTAATAGGTTTGTAATGGTCTC CACGGATAAGGCTGTTAATCCTACTAATGTAATGGGAGCCTCTAAAAGAGCTGCAGAGCTTTTTGTGCAAGCTCTTCAAA ATGAGGAAGATAATCAGACTAAATTTATTACCACTAGATTTGGTAATGTTTTAGGTTCTAACGGTTCTGTAATTCCTCAT TTTATAAAACAAATAGAGAAGGGTGGTCCAGTTACAATTACACATCCTGAAATAGTAAGGTATTTTGTGACCATTCCTGA AGCGTGTGAACTTGTTTTACAAGCAGGAACTATGGGAAAAGGAGGAGAAATATTTGTGTTTGATATGGGGGAATCTGTGA AGATACTCAATCTTGCGCGAAGAATGATTAAATTGTCTGGTCTAGAGCCAGATGTAGATATAAAAATTATTTATACAGGT CTAAGACCAGGGGAGAAACTGTATGAAGAACTTTTGAGTGATGATACAAAAACCCTTCCTACGTATCACGAGAAAATCAT GATTTCTAAGGACTCAGTTATGTTGTATGAAGAAATAGATGAATTAACATCTAGAATATATGAGAAAGCTAAAGGTAGAG ATAAAGTAGAGGTGGTTAGAATTTTGAAGGAGATAGTTAGAGAGTTTAGAAGTAATGACTCGGTATTTGAATGTTTGGAT AAATAG Protein sequence : MNFSELKNKIYGGDNMISLSNIRYLPRWMVLLIDVLFLIVSLMLSYGVVGKLSSVSYPYVLSIYQKYAVVLGVNIFFMFL FRTYSGIIRHSTFVDLSKILLASFCTVFTLGTVTYIYFFFFKQKLLLFPILLIYFCISFTVLFVFRLVVKEIFQWAKEYR RSYLRKKILLLGIGEESVAIAKAVMGNPFLPYEVVGFITARKDSRKAKLLGKRIYTRDFLEKTTREYLGIDGVLIGSNTA SIEEIAEWVNLFLEKDLKVFKSPTVQKLRNDGSNIKNFQIEDLLNRKPIVIENEEVKKRHHQKSVLVTGGAGSIGSEIVR QVAQFEPSLIVVLDQAETPLHEIQLEVEENYPDIKFEFILADITNKERLESVFKEYNFSMVYHAAAYKHVPLIENNPHEA ALVNIQGSKNLALLSSRFKVNRFVMVSTDKAVNPTNVMGASKRAAELFVQALQNEEDNQTKFITTRFGNVLGSNGSVIPH FIKQIEKGGPVTITHPEIVRYFVTIPEACELVLQAGTMGKGGEIFVFDMGESVKILNLARRMIKLSGLEPDVDIKIIYTG LRPGEKLYEELLSDDTKTLPTYHEKIMISKDSVMLYEEIDELTSRIYEKAKGRDKVEVVRILKEIVREFRSNDSVFECLD K |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-72 | 41 |
