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Name : RA0C_0994 (RA0C_0994) Accession : YP_005394470.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_017045 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 972886 - 974169 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGAAAAATAAAATCGCTATTATCGGTTTGGGCTATGTAGGTTTGCCTTTAGCAAGATTGTTTGCTACTAAATATTCTGT GGTAGGGTTTGATATAAATAAGGAGCGTGTTGCAAAACTCAATCAAGGGCACGATGACACTTTAGAAGTAGCAGATGATA TTTTACAAGCGGCATTGGTTCAAGAAAATCCATTTCCAACCGGAAAAATAGGGCTATACTGTTCTGCTGATTTGAATGAT ATTCAAGATGCTAATGTTTACATCATTACCGTACCAACACCCGTGGATAAAAATAATCGTCCTGTTTTGACTCCTCTAAT AAGAGCTAGTGAAACTGTAGGGAAAGTATTAAAAAAAGGAGATATTGTGATTTATGAATCTACAGTTTATCCTGGAGTAA CCGAGGAAGATTGTATTCCTGTATTGGAAAGAGTATCTGGTTTGAAGTTTAATGAAGATTTTTATGCAGGCTATTCTCCC GAACGAATTAACCCAGGTGATAAAGAGCATACTGTAGAAAAAATATTAAAGGTTACATCTGGCTCTACTTCTGAAATAGG TAGAATAGTAGATGAGTTGTATAAATCTGTTATTACTGCAGGGACTCACTTGGCTCCGACAATCAAAGTTGCAGAGGCGG CTAAAGTGATTGAAAATTCCCAAAGAGATATCAACATAGCTTTTGTAAATGAGTTGGCAAAAATATTTAGTCTCATGGGT ATTGACACTCATGCAGTTTTGGAAGCAGCAGGAACAAAATGGAATTTTTTGCCATTTAAACCAGGCTTAGTAGGAGGGCA TTGTATTGGTGTTGATCCTTACTATTTAGCTCAAAAAGCTCAAGAATATGGTTACCATCCAGAGATTATTTTGGCTGGTC GTCGTTTAAATGATTCTATGGGGAAATATGTAGCGGAACAAGTGGTAAAAGCGATGATAAAAAAAGATATTCCTGTAAAT AATGCGGAGGTCTTGATGCTGGGGGTGACTTTTAAGGAAAATTGTCCTGATGTCCGTAATACTAAGATTGTAGATGTGAT TGCAGCTTTAGAAGATTTTGGAGTGAAAGTAACAACCTATGATCCATGGGCTTGTCCTGAAGAGGTTAAACATGAGTATG GTATTGAAAGCACTAAGAATTTACCATCTCAAAAGTTTGATGCCGTAGTTTTAGGGGTGGCTCATAGAGAATTTAAGACA TTGGATTTATCTCTGCTTAAAAAAGACAATGTAGTGGTGTACGATGTGAAAGGAATTCTTTCGTACTATGATGATAGATT ATAA Protein sequence : MKNKIAIIGLGYVGLPLARLFATKYSVVGFDINKERVAKLNQGHDDTLEVADDILQAALVQENPFPTGKIGLYCSADLND IQDANVYIITVPTPVDKNNRPVLTPLIRASETVGKVLKKGDIVIYESTVYPGVTEEDCIPVLERVSGLKFNEDFYAGYSP ERINPGDKEHTVEKILKVTSGSTSEIGRIVDELYKSVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFSLMG IDTHAVLEAAGTKWNFLPFKPGLVGGHCIGVDPYYLAQKAQEYGYHPEIILAGRRLNDSMGKYVAEQVVKAMIKKDIPVN NAEVLMLGVTFKENCPDVRNTKIVDVIAALEDFGVKVTTYDPWACPEEVKHEYGIESTKNLPSQKFDAVVLGVAHREFKT LDLSLLKKDNVVVYDVKGILSYYDDRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-115 | 58 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 1e-115 | 58 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 5e-103 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RA0C_0994 | YP_005394470.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 4e-116 | 58 |
