Gene Information

Name : RA0C_0984 (RA0C_0984)
Accession : YP_005394460.1
Strain : Riemerella anatipestifer ATCC 11845
Genome accession: NC_017045
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 961537 - 962142 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence : 
ATGTATAGAGATTTTTTTAAACCTATTATGGATTTCACTTTGGCTCTTGTTGGTTTCTTGCTATTAAGTCCTGTTTTTAT
TTTAGTTACAATAGGTTTGTTTTTTGCAAACCAAGGGAAGCCTTTCTTTTTTCAGAAAAGACCTGGGAAAAATGAACGTA
TTTTTAGTATCATTAAGTTCAAAACAATGAATGATAAAAAAGATGCTAATGGTAATTTATTGTCTGATGCAGAACGCTTA
ACAGCAATAGGTAAATTCGTTAGAAAAACATCGTTAGATGAAATTCCGCAACTATTAAATGTAATTAAGGGAGATATGAG
CTTAGTTGGTCCAAGACCTCTACTACCACAGTATTTGCCATTATATAATGAGGAACAGAAAAAAAGACATAATGTGCGTC
CTGGCATTACAGGTTGGGCTCAAGTCAACGGCAGAAACGCTATCTCGTGGCAGCAAAAATTTGAATACGATGTTTGGTAT
GTAGAAAATATCTCACTATCTTTGGATATCAAAATTTTATTATTAACGGTAAAGAAAGTCTTTGTCTCCGAGGGGATTTC
CCAAGAAGGACAGGCAACTATAGAGCCATTTAAAGGGAATGAATAG

Protein sequence : 
MYRDFFKPIMDFTLALVGFLLLSPVFILVTIGLFFANQGKPFFFQKRPGKNERIFSIIKFKTMNDKKDANGNLLSDAERL
TAIGKFVRKTSLDEIPQLLNVIKGDMSLVGPRPLLPQYLPLYNEEQKKRHNVRPGITGWAQVNGRNAISWQQKFEYDVWY
VENISLSLDIKILLLTVKKVFVSEGISQEGQATIEPFKGNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-21 44
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RA0C_0984 YP_005394460.1 sugar transferase VFG1309 Protein 7e-23 42