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Name : RA0C_0461 (RA0C_0461) Accession : YP_005393983.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_017045 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 437834 - 439534 bp Length : 1701 bp Strand : - Note : - DNA sequence : ATGATGCATTTATCAGAACAAGAAATTATCCGTAGAGAAAAGTTAGAAAAACTTTCTCAAATGGGCATAAATGCCTTTCC GGCAGACGAATATGCTATTACACATACCACACAATCTATAAAAGAAAATTTTCAAGAAGGAAGCAAGGTTAAAATCGCTG GTAGGCTAATGTCTAGAAGAATCCAGGGGAAAGCTTCTTTTGCCGAATTACAAGATAGCGAAGGCAGAATACAAGTGTAT TTTAATAGAGATGAAATTTGTCCTGAGGAAGACAAAACCCTTTATAACGAAGTTTATAAGCATCTTTTAGACATTGGAGA TATTATAGGCGTAGAGGGAGAATTGTTCAAAACTCAAGTAGGAGAAATGACGGTAATGGTTAAAAATTTCACTCTATTAA CCAAAACTCTTCGTCCACTTCCTCAACCAAGAACTGATGAAAATGGTGTGGTACACGATGCTTTTAACGACCCTGAACTT CGTTATAGACAGCGCTACGTGGATCTTACAGTAAACCCACATGTTAAAGAAATTTTTGTAAAAAGAACGAAATTGTTTAA CGCAATGCGTGGGTTCTTTAATGACGCTGGATATTTTGAGGTAGAAACGCCTATTTTACAGGCTATTCCAGGTGGAGCTT CAGCAAGACCATTCATTACACATCATAATGCCTTGGATATTCCACTATATATGAGAATTGCTAACGAGCTTTATCTTAAA AGACTTATCGTAGGCGGGTTTGATGGGGTGTATGAGTTCTCCAAAAACTTCCGTAACGAAGGTATGGACCGAACTCACAA CCCTGAGTTTACAGCCATGGAGATTTATGTGGCGTACAAGGATTACAACTGGATGATGGATTTTACCGAAAGACTGTTGG AGCATTGTGCTACTGCGGTGAATGGGAAACCTGAATCTCAGTTTGGCGAACATACCATCAATTGGAAAGCCCCTTACCCA AGAATTTCCATGACGGACGCCATTCGGAAATTTACGGGGTTTGATATTACGGGAAAAACCGAAGAGGAACTTAGAACCTT TGCCAAATCCATCGGTATTGAAGTGGATGACACGATGGGGAAAGGCAAGCTCATTGATGAAATTTTCGGAGAGAAGTGCG AAGGTAACTTTATTCAGCCGACCTTCATTACTGACTACCCTATCGAAATGTCGCCGCTTACTAAAAAGCACAGAAGCAAA GAGGGCTTAACCGAAAGATTTGAGTTGATGGTTTGTGGAAAAGAAATTGCGAATGCTTACTCTGAGCTTAACGACCCTAT TGACCAAAGAGAACGTTTTGAAGAGCAACTTAAACTTTCAGAAAAGGGTGATGACGAAGCGATGTTTATCGACCAAGATT TCCTAAGAGCTTTAGAATACGGTATGCCGCCTACGGCTGGTTTGGGTATCGGTATGGACAGGTTGGTGATGTTCTTAACG AATAATGCTTCTATTCAGGAGGTTTTATTCTTCCCTCAAATGAGACCAGAAAAGGCTCAGCCTAAAGTAGAGATTGGAGA AAATGAAGAAATTATCCTTGGTATTCTTAATAAAAACAACGGTAAAATGCTGATAGCTGACTTAAAAACTCAATCAGGCT TAAGTGGAAAGAAATGGGATAAGTCTTCTAAACTATTAGTTTCTAATAATTTAATTTCTCTAGTAACTGAAGGTGAGGAT AAATATTTCCAAATAGTTTAA Protein sequence : MMHLSEQEIIRREKLEKLSQMGINAFPADEYAITHTTQSIKENFQEGSKVKIAGRLMSRRIQGKASFAELQDSEGRIQVY FNRDEICPEEDKTLYNEVYKHLLDIGDIIGVEGELFKTQVGEMTVMVKNFTLLTKTLRPLPQPRTDENGVVHDAFNDPEL RYRQRYVDLTVNPHVKEIFVKRTKLFNAMRGFFNDAGYFEVETPILQAIPGGASARPFITHHNALDIPLYMRIANELYLK RLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHCATAVNGKPESQFGEHTINWKAPYP RISMTDAIRKFTGFDITGKTEEELRTFAKSIGIEVDDTMGKGKLIDEIFGEKCEGNFIQPTFITDYPIEMSPLTKKHRSK EGLTERFELMVCGKEIANAYSELNDPIDQRERFEEQLKLSEKGDDEAMFIDQDFLRALEYGMPPTAGLGIGMDRLVMFLT NNASIQEVLFFPQMRPEKAQPKVEIGENEEIILGILNKNNGKMLIADLKTQSGLSGKKWDKSSKLLVSNNLISLVTEGED KYFQIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-101 | 44 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RA0C_0461 | YP_005393983.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-102 | 44 |
