|
Name : RA0C_0243 (RA0C_0243) Accession : YP_005393794.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_017045 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 203357 - 204886 bp Length : 1530 bp Strand : - Note : - DNA sequence : ATGAAAAAAACATTTATTGGCCTAGGCTTATTGCTTAGTGTTTCTGCCTACATGGGGCAACAGACTCTCACGACTAATTT TGGTGCTCCTGTGGGAGATAATCAGAACTCTCTTACAGTTGGCAACAATGGTGCTGTACTTTTACAGGATATTCACCTGG TAGAAAAGTTGGCAGCTTTTGATAGGGAAAGAATACCTGAAAGAGTAGTGCATCCTAGAGGAGCTGGAGCTTATGGTGAA TTTGAATGTAAAGTAGATATGTCTCCTTACACAAAGGCAAGGCTTTTTAGTGAAGTAGGTGTTAAAACCCCTGTTTTTGT TAGATTTTCTACAGTAATACATGGTACAGGTTCGCCAGAAACTCTTAGAGATCCAAGAGGGTTTGCTACAAAATTTTATA CCAAAGAGGGGAATTATGATATTGTAGGAAATAATTTACCTGTATTTTTCATTAGAGATGCTATTAAATTTCCTGATATG GTTCATTCTCTAAAACCATCTCCTATAACCAATAGGCAAGATCCAAATCGTTACTTGGACTTTTTTTCTCACATTCCAGA ATCTACACATATGTTAATGAGATTGTATTCTGATTATGGTATACCTGCAAATTATAGAGAAATGGACGGCTCTAGTGTAC ATGCATTTAAATGGATTAATAATAATGGAGAGGTTGTGTATGTAAAATATACATGGAAAAGTAAACAAGGAGAAAGAAAT TTAAGCATGGAGGAGGCTTCTAAAATACAGGGAATGGATTTTCAACACGCCACAACAGATTTATACGACAATATAAAGAA AGGTAATTATCCTCAGTGGGATTTATATGTACAGATTTTAAAACCTTCCGATTTTGATAAATTAGATTATTTTCCTTTGG ATGCAACTAAAATTTGGAATGAGACAGATGCTAAACCTATGCTAATAGGAACTATGACACTCAATAAAATTCCAGATAAT TACTTTGAACATGTGGAGCAATCTGCTTTTTCTCCAGGGACTCTTATTCCAGGTATTGAGCCTTCCGAAGATAAACTTTT ACAAGGACGTCTTTTCTCTTACTTTGATACACAAAGGCATCGTGTTGGAGCTAATTTTCAAAAATTAGCTGTTAATAGGC CTATTGTTAGTGTAAATTCTAACAATCAAGATGGACCTATGAGTGAGAGGGGTACTAAGAGCGATACAAACTATCAGCCA TCTAGAATAAATAATAAACCTGATGATGCTAAGTACAAGCAATCCAAAAGAGAATATTCTAATGTGTTTATTACTCAAGA TAAAATTGATAAACCTAATGACTTTAAACAAGCAGGAGATTTTTATAGGAGTTTAGATAAAAAGAATCAAGAAAATCTTC TTAAGAATTTGTTAGCAGATCTTAAACAAGTTACAAATAAGGATATTCAAAAAATAATAACAGGACATTTTTATATGGCA GATAACTCATTAGGTAAAAAAATAGCCTCTGAACTTAAGCTTACTAGAGAGGATGTGGAAAGTATATTCCATAAAAAGTA TAAAAAATAA Protein sequence : MKKTFIGLGLLLSVSAYMGQQTLTTNFGAPVGDNQNSLTVGNNGAVLLQDIHLVEKLAAFDRERIPERVVHPRGAGAYGE FECKVDMSPYTKARLFSEVGVKTPVFVRFSTVIHGTGSPETLRDPRGFATKFYTKEGNYDIVGNNLPVFFIRDAIKFPDM VHSLKPSPITNRQDPNRYLDFFSHIPESTHMLMRLYSDYGIPANYREMDGSSVHAFKWINNNGEVVYVKYTWKSKQGERN LSMEEASKIQGMDFQHATTDLYDNIKKGNYPQWDLYVQILKPSDFDKLDYFPLDATKIWNETDAKPMLIGTMTLNKIPDN YFEHVEQSAFSPGTLIPGIEPSEDKLLQGRLFSYFDTQRHRVGANFQKLAVNRPIVSVNSNNQDGPMSERGTKSDTNYQP SRINNKPDDAKYKQSKREYSNVFITQDKIDKPNDFKQAGDFYRSLDKKNQENLLKNLLADLKQVTNKDIQKIITGHFYMA DNSLGKKIASELKLTREDVESIFHKKYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 9e-74 | 42 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 9e-74 | 42 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 9e-74 | 42 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 9e-74 | 42 |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-80 | 41 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 2e-75 | 41 |
