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Name : RA0C_1704 (RA0C_1704) Accession : YP_005395134.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_017045 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 1717210 - 1718697 bp Length : 1488 bp Strand : - Note : - DNA sequence : ATGTCTCATAAAAAACTCACCACCGTCTCTGGAAGTCCTTACTACGAATACGAAGACTCACAGACTGTAGGCTCTAGAGG TCCTGTCCTATTACAAGATTTTGTTTTACAGGAAAAACTGGCACATTTCGTAAGAGAAAGAATACCAGAAAGAGTAGTAC ATGCAAAAGGGACAGGAGCTTACGGAACATTTACCGTAACCAATGATATTACCAAATATACTAAAGCTAAGCTCTTCTCT AAAGTAGGCAACACCTGCAAGATGTTTGCTCGTTTCTCAACAGTTGGTGGTGAGAAAGGTAGTGCCGATACCGAAAGAGA CCCAAGAGGCTTCGCTCTTAAATTTTATACAGAAGACGGAAATTGGGATTTGGTGGGCAATAATACACCTGTATTCTTCA TTAAAGATGCCAAAAAATTCTCCGATTTCATTCATACACAGAAAAGACACCCAAAAACTAACCTCAAAAGCCACACCATG ATGTGGGATTTTTGGTCTCTTAACCCTGAATCTCTTCATCAAGTGCTTATCCTGATGTCAGATAGAGGTACACCTTACGG CTATCGCCATATGCACGGCTTTGGCTCTCACACCTTTTCTATGATTAACGCTAATAATGAAAGGGTTTGGGTGAAATTCA ATTTTAAAACTCAACAAGGTATTAAAAACTTTACCGATGAGGAAGCTGTGAAAATGAAAGGTGAAAATCCAGACTTTGCT CAAGAAGACCTTGTAAATGCAATAGAAAGTGGCAACTTCCCTAAATGGACACTCTACATACAGGTAATGACCGAAGAACA GGCTAATGAGTTTCGTTGGAATCCTTTTGATATAACCAAAGTTTGGCCTCATAGCGAGTTTCCTTTAATAGAAGTTGGAG AAATGGAACTCAACAAAATTCCTAATAATTATTTTGCCGAAGTAGAACAATCTGTTTTTGCTCCTAGTAATATTATTGAT GGCATTGGACTTTCCCCTGACAAAATGCTACAAGGACGCATCTTCTCCTATCCAGATGCACATCGTTATAGAGTGGGCGT TAATGCTTATCAGTTGCAGGTTAATCGTTGCCCATTCTCGGTAAATCATTATCATAGAGATGGTGCAATGGCAGATGCTT CAAACTATAAAGATAGTCCAAACTATTATCCAAATAGCTTTGATGATATAAAACCTGACTCTTCCTACAAAGCCCACGAA TATCATTTAGATAATAATAAAGTGGCTTTTTTCAACCGAAATGAAAATGATGATGACCATTTTACACAACCTGGATTACT TTATTCCAAAGCGATGGACGACCAAGCTAGAGCCAACCTTGTGAAAAATATTATAAACCATATGCAAAAAATTGATGGTG AAAGAAGAGAAGAAATCATCAATAGACAGCTATGTCATTTCTTCCGTGCTAATTTGGATTTAGGAATGAAAGTAGCTTCT GGACTTGGCATCAGCATCAATTTTAATGATATGCATCAGCAAAAGTAA Protein sequence : MSHKKLTTVSGSPYYEYEDSQTVGSRGPVLLQDFVLQEKLAHFVRERIPERVVHAKGTGAYGTFTVTNDITKYTKAKLFS KVGNTCKMFARFSTVGGEKGSADTERDPRGFALKFYTEDGNWDLVGNNTPVFFIKDAKKFSDFIHTQKRHPKTNLKSHTM MWDFWSLNPESLHQVLILMSDRGTPYGYRHMHGFGSHTFSMINANNERVWVKFNFKTQQGIKNFTDEEAVKMKGENPDFA QEDLVNAIESGNFPKWTLYIQVMTEEQANEFRWNPFDITKVWPHSEFPLIEVGEMELNKIPNNYFAEVEQSVFAPSNIID GIGLSPDKMLQGRIFSYPDAHRYRVGVNAYQLQVNRCPFSVNHYHRDGAMADASNYKDSPNYYPNSFDDIKPDSSYKAHE YHLDNNKVAFFNRNENDDDHFTQPGLLYSKAMDDQARANLVKNIINHMQKIDGERREEIINRQLCHFFRANLDLGMKVAS GLGISINFNDMHQQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-117 | 54 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-100 | 49 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-95 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-95 | 48 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-95 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-95 | 48 |
