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Name : RA0C_1442 (RA0C_1442) Accession : YP_005394879.1 Strain : Riemerella anatipestifer ATCC 11845 Genome accession: NC_017045 Putative virulence/resistance : Virulence Product : ATPase AAAgene domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 1447930 - 1450437 bp Length : 2508 bp Strand : + Note : - DNA sequence : ATGATGAGTAATAAATTTTCGGGAGGATTGGATAAAGTCCTCAAAGCGAGTGCTAAAGAAGCAAAAAGATTAGAAAGTGA ATTTCTTAATACCGAACACCTTCTTTTAGGGATTATTAAAACAGATAATTCTGCGAGGGAAATATTACAGAATTTACAGG TAGATTTAACCCAAATAAGACGAAAGATAGAAGCTTTAAACTCTTTAAGTTCTAATGTTTTTCCACCGAAAGAAATGGAG GTAATTCCATTTACTAAAATGGCAGATTATGCACTTAAAAGAGCTGATTTGGAAAGTAAAAGTTACCGTTCAGAACATAT CAATACGGTTCACTTGCTATTGGGTATTCTTTACAAAATGGAAGACCCTACCACTCAGATTCTAGAAAGTTATGATGTAG ATTATGAGGCGGTTACTAAAGAGTATCGCACGATGTTAGAGCAGAACGGGATTTCGCCTAAAATGAGTAGTGAGTATGAT GATAGTAATGAGGAAAGAGAAAGCTTTGGGCAACCTAATAAATCAAGTAGCAGTATCGGAACTGCAAAAAGTAAAACACC TACCTTGGATAATTTCGGTAGAGATTTAACGGCTTTGGCTAAGGAAGGAAGGTTAGACCCAGTAATTGGTAGGGAAAAAG AGATAGAACGAGTATCACAAATTCTGTCCAGAAGAAAGAAAAATAATCCACTCCTTATTGGAGAGCCAGGTGTGGGGAAA TCTGCTATTGCAGAGGGGTTAGCATTAAGGATACATCAGAAAAGAGTTTCTCGTGTATTGTACAACAAGCGTGTAATTAC TTTAGATTTAGCAAGTTTGGTTGCGGGTACAAAGTACAGAGGTCAGTTTGAGGAAAGAATGAAAGCAATTATGACAGAAC TAGAAAAAAATAGAGATGTCATTTTGTTCATAGACGAGTTGCATACTATTGTAGGGGCGGGAGGTTCTACGGGAAGTTTA GATGCGTCTAATATGTTCAAACCTGCTTTGGCAAGGGGAGAAATACAATGCATTGGAGCTACTACTTTAGATGAGTACAG ACAGCATATAGAGAAAGATGGTGCTTTGGAGAGACGTTTCCAAAAAGTAATGGTAGAGCCGACTTCCATAGAAGAAACCA TTCAGATTTTGTATCAAATTAAAGATAAGTACGAAGAACATCACAATGTAATTTATACAGATGACGCTATCAAGGCTTGT GTTAATCTTACCTCTAGATACATCACAGATAGATTTTTACCAGATAAAGCCATAGATGCTATGGACGAAGCGGGTTCTAG GGTTTACATTAAAAATATGAAAGTCCCTACCGAACTTGTAGATTTTGAAGCCAAAATAGAAGAAGTTAAAGACCTTAAAC AAAAAGCGGTTAAAGCTCAAGATTACCTAGAAGCGAGAAGGCTTAAAGATGAAGAAGAGCGTTTACAAATAGAACTTAAT TTGGTTCAGGAAGAATGGGATAGAAATGTAAAAGAGATGAAAGAAACGGTTACGGAGGAGAATGTCGCAGAAGTAGTATC AATGATGAGTGGTGTTCCTGTAACTAAAGTTGGCAAAAACGAACTTGATAAACTTGCCGAAATGGACAAAAACCTTAATG GTAAGGTAATTGGTCAAGAAGAAGCCGTTAAAAAAGTAGTGAAATCTATCCAAAGAAATAGAACAGGACTAAAAGACCCT AACCGTCCTATTGGTACTTTTATTTTCCTAGGAACAACAGGAGTTGGTAAAACAGAGCTAGCTAAAGTGATGGCTAAGGA ATTATTCAACTCCGAAGATGCACTCATAAGAATAGATATGAGCGAATATATGGAGAAATTTGCGGTGTCTAGACTTGTAG GGGCGCCTCCAGGATATGTGGGGTATGAAGAAGGCGGACAACTTACAGAAGCCGTTAGAAGAAAGCCTTATTCGGTAGTG CTTTTAGATGAGATAGAAAAAGCTCACTCTGATGTGTTTAACCTATTGTTGCAGATTTTAGATGAAGGTTTCGTAACCGA TAGTTTGGGTAGAAAAATAGACTTTAGAAATACGATTGTTATTTTGACCTCTAACATTGGTACTCGTCAACTGAAAGATT TTGGTGATGGTGTAGGCTTCGGAACTTCAGCGAAAAAATCTAGTACCGATGCCCACGCAAGAAGTACGATAGAGTCGGCT CTTAAAAAAGCATTTGCTCCGGAGTTTTTAAATAGAATAGATGATATTATTATTTTCAACGCTTTAGAGAAAGAAGATAT TAAGAAAATTATAGATTTAGAACTTAATAAACTTTACCAAAGATTAAGCAAACTAGGTTATACCGTAAGTCTTACAGAGG AAGCCAAGGACTTTATTGCTGAGAAAGGTTGGGATAAAGACTTCGGTGCTAGACCACTGAAAAGAGCGGTACAAAAGTAC ATAGAAGATTTACTAGCCGAGCTTTTGGTAACCAAACAATTAAGCGAAGGCGAAAGTGTAGTCTTAAAATTAAATGAAGC TAAAGACGCTTTAGAAAAACAAAATTAA Protein sequence : MMSNKFSGGLDKVLKASAKEAKRLESEFLNTEHLLLGIIKTDNSAREILQNLQVDLTQIRRKIEALNSLSSNVFPPKEME VIPFTKMADYALKRADLESKSYRSEHINTVHLLLGILYKMEDPTTQILESYDVDYEAVTKEYRTMLEQNGISPKMSSEYD DSNEERESFGQPNKSSSSIGTAKSKTPTLDNFGRDLTALAKEGRLDPVIGREKEIERVSQILSRRKKNNPLLIGEPGVGK SAIAEGLALRIHQKRVSRVLYNKRVITLDLASLVAGTKYRGQFEERMKAIMTELEKNRDVILFIDELHTIVGAGGSTGSL DASNMFKPALARGEIQCIGATTLDEYRQHIEKDGALERRFQKVMVEPTSIEETIQILYQIKDKYEEHHNVIYTDDAIKAC VNLTSRYITDRFLPDKAIDAMDEAGSRVYIKNMKVPTELVDFEAKIEEVKDLKQKAVKAQDYLEARRLKDEEERLQIELN LVQEEWDRNVKEMKETVTEENVAEVVSMMSGVPVTKVGKNELDKLAEMDKNLNGKVIGQEEAVKKVVKSIQRNRTGLKDP NRPIGTFIFLGTTGVGKTELAKVMAKELFNSEDALIRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVV LLDEIEKAHSDVFNLLLQILDEGFVTDSLGRKIDFRNTIVILTSNIGTRQLKDFGDGVGFGTSAKKSSTDAHARSTIESA LKKAFAPEFLNRIDDIIIFNALEKEDIKKIIDLELNKLYQRLSKLGYTVSLTEEAKDFIAEKGWDKDFGARPLKRAVQKY IEDLLAELLVTKQLSEGESVVLKLNEAKDALEKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-168 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RA0C_1442 | YP_005394879.1 | ATPase AAAgene domain protein | VFG0080 | Protein | 4e-150 | 51 |
| RA0C_1442 | YP_005394879.1 | ATPase AAAgene domain protein | VFG0079 | Protein | 0.0 | 48 |
