Gene Information

Name : MC1_03715 (MC1_03715)
Accession : YP_005392908.1
Strain : Rickettsia parkeri Portsmouth
Genome accession: NC_017044
Putative virulence/resistance : Virulence
Product : KpsF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 645737 - 646696 bp
Length : 960 bp
Strand : -
Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation

DNA sequence :
ATGACCAACACAAATAATTACCGAATTATCGCAAAGAGGGTTATTTCTAGTGAAGCAAGTGCTTTAGAAAAATTATCCGA
AAATATCCCTGAAGACTTTAACAGAATTATAGAATTTTTACTATCTTTCAAAGGACGGATAATCCTAACCGGCATAGGCA
AAAGCGGTTATATTGCAAGAAAAATAGCTGCTAGCTTTTCTTCAACCGGTATGCCTGCTTTTTATTTACATCCGGCAGAA
GCAAGTCACGGCGATTTAGGTATGGTGACGAGAAATGATCTAGTAATTATGTTATCTAATTCCGGCGAAACTAAAGAACT
ATTTAATATAATTGAATATTGCAAGAACTCTTCCATAAAAATTGCTGCAATGACAATGAATAAAAATTCTACTTTAGCTA
AAAGAAGCGATTTTTTATTAATAGTACCTGAATACCCAGAAGCTTCTGTAATTGGAGTTCCTACTATATCATCTTTAATC
ATGCTATCACTTGGTGATGCTTTAATGACTGTTATACATGAAAAACGAGGCTTTACTAAAGATGATTTTAAAATTTATCA
TCCGGGAGGTACAATCGGCGCTAATTTAACAAAAATTAAAAACCTAATGCGTAGCGGTGATGAAATACCTTTAGTATATG
AAGATACTTCCTTTGCCAAAACTATAATTATTATGAATAAAAAACGTTTAGGTTGTACGCTTGTAACAGATAAAAACCAA
AATTTGGTGGGAATTATAACCGATGGGGATTTACGTCGTCATATTAACGATCAAATCCACTTAAAAACAGCATCAAGCAT
TATGACCAAAAACCCTATTCATATCTCATCGGAAATATTTGCAAAAGAGGCTTTAAATTTAATGAAAGCCAAGAATATCA
CTAATATACCGATTGTTGATGATAATATTATTATAGGCATTATTCATATTCATGATTTACTACGCATAGGGGTTAGCTAA

Protein sequence :
MTNTNNYRIIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAE
ASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIGVPTISSLI
MLSLGDALMTVIHEKRGFTKDDFKIYHPGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDKNQ
NLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDDNIIIGIIHIHDLLRIGVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-39 41