Gene Information

Name : MCI_04465 (MCI_04465)
Accession : YP_005391785.1
Strain : Rickettsia montanensis OSU 85-930
Genome accession: NC_017043
Putative virulence/resistance : Virulence
Product : chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 772464 - 775037 bp
Length : 2574 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAATATTGATAAATTTACTGCACATGCTAAATCAGTGATAGCTAGTAGCCAATCACTTGCTGCTAAAAATGATCATCA
GCAAATATTACCTTTGCATTTATTATCTAGTCTTTTAAGTGAAGAAACAGGTATAATTCAAACCCTTATTAATAATACCG
GCGGTAATATAAACTTATTAAAAGATCAAGTTCAGCTAGAACTAAATAAAATCCCAAAAGTTCAGGTTGAGGGAGGGGGA
CAAGTTTATTCTTCTGCTGAAGCTCTTAAAGTTTTAGAAAAAGCTAGTAGCATTGCTAAAGACAGTGGGGATAGCTTTGT
AACCATAGAGCGTATATTTGAAGCATTAACTTATGATAATACTATAGCCGGTAAAATTTTAACGAATAATGGAATTAATA
ATAAAAAAATAGTAGCAGCTATTTTACAGCTTCGTAAAGGCAAAAAAGCAGATACCGAATCGGCAGAAAATAGTTACGAT
GCTCTAAAGAAATACGGCAGAGACGTAACAGAGCTTGCCGAAAGCGGTAAGCTTGACCCGATAATCGGGCGTGATGAAGA
AATAAGAAGAACGGTGCAGGTACTATCACGACGTATGAAAAATAATCCTGTATTGATCGGCGAACCTGGAGTCGGTAAAA
CTGCTATAATAGAGGGGCTTGCACAACGAATATTTAGTAAGGACGTACCTGAATCGCTTATTAATTGTCGTATTATTGAG
CTTGATATGGGAGCTTTAATAGCGGGAGCTAAATATCGAGGCGAATTTGAAGAGCGTCTTAAAGCAGTGCTTAGCGAAAT
CAAAGAATCAAGCGGTGAAATTATTTTATTTATCGATGAATTGCATCTATTAGTCGGTACGGGAAAAACCGACGGTGCTA
TGGATGCCTCGAATTTACTAAAGCCGATGCTTGCTCGTGGTGAGCTGCATTGTATCGGTGCTACTACTCTAGATGAATAT
CGTAAATATATCGAGAAAGATGCAGCACTTGCTCGTCGTTTTCAGCCTGTTTACGTGAGTGAGCCGACGGTTGAGGATAC
TATATCAATACTTAGAGGAATTAAAGAAAAATATGAGCTGCATCATGCAGTGCGAATTTCCGATAGTGCAATAGTTGCAG
CAGCGACGTTATCAAACCGTTATATTACCGATCGTTATTTACCTGATAAAGCTATTGATTTGATTGATGAAGCTTGTAGC
CGTATGAAAATAGAGCTATCAAGTAAACCAGAAGAGCTTGATGAGCTGGACCGTCGTATTATTCAGATAAAAATAGAGCT
TGCAGCACTTAAAAAAGAAAATGACGAGCATTCTAAAAAGAAAATAGAGCATTTAACTACAGAATTAGAAAAATTAGAGT
CTAAATCCTATGATATGGGAGCTAAATGGCAAGCTGAAAAGTCTAAACTACAGCAAACACAAAAGCTCAAAGAAGAACTA
GACCGTAGCCGAAACGAGCTTGAACGTGCCGAACGTGATGCTAATCTCGCTAAAGCTAGTGAGCTAAAATACGGAATTAT
ACCTGAGATTATGAAAAAGATTCAGGAAGCCGAAAGTATGGATAATAAAGGGCTGTTAAAAGAAATTGTATCGGAAAGCG
ATATAGCAAGTATTATCTCTCGTATTACTGGTATTCCAATTGATACGATGCTATCAAGTGAACGTGAGCGTCTGCTTGTG
ATGGAGCAGAAATTACGAGAATCGGTAATAGGGCAGGATGAGGCAATTAAAGGTGTTAGTGATGCGGTAAGAAGATCACG
TGCAGGGATTCAAGATATTAACCGCCCGCTTGGTTCGTTCTTATTCTTAGGACCGACCGGAGTCGGTAAAACCGAGCTTA
CCAAAGCCTTAGCTGGTTTTCTTTTTGATGACCGTAATGCAATACTTCGTATAGATATGTCGGAATATATGGAGAAGCAC
GCTATTTCTCGCCTGATAGGAGCTCCTCCCGGCTATATCGGATATGATCAAGGCGGGGTGTTGACGGAGGCAGTAAGACG
CCGTCCTTATCAGGTAATATTATTTGATGAGGTTGAAAAAGCCCATCCCGACATATTTAATATTATGCTGCAAATACTTG
ATGAGGGAAGATTAACAGATAGTCAAGGTATAACGGTTGATTTTAAGAATACTATAATAGTTTTAACGTCTAATTTAGGT
GCTGAGATACTCGTTAATCAGAAAGAGGACGAAGATATATATAAAGTAAAGGATGAGGTTATGGAATATGTAAAAGCAGT
ATTTAAACCCGAGTTTTTAAACAGACTAGACGAGATTATATTATTCCATCGCCTAAATCGTAATAATATTCATGATATAG
TTAAGATACAGCTTGAAAGCTTAAAGAAAATTTTACTAGCACAAAATATTATTCTTGAATTTGATGAATCTGCCTTAAAT
TATTTAGCCGAAAAAGGTTATGATCCAAGCTTTGGAGCAAGACCCTTAAAACGCCTTATCCAGCGGGAAATACAAAATAA
TTTAGCCAAAATGATTTTAGCAGGCGAAATAAGTAGCGGTAAAACGGTTAAAATAAATGCAAAGGATAAAGAATTGAAGG
TAACAATGAGTTGA

Protein sequence :
MNIDKFTAHAKSVIASSQSLAAKNDHQQILPLHLLSSLLSEETGIIQTLINNTGGNINLLKDQVQLELNKIPKVQVEGGG
QVYSSAEALKVLEKASSIAKDSGDSFVTIERIFEALTYDNTIAGKILTNNGINNKKIVAAILQLRKGKKADTESAENSYD
ALKKYGRDVTELAESGKLDPIIGRDEEIRRTVQVLSRRMKNNPVLIGEPGVGKTAIIEGLAQRIFSKDVPESLINCRIIE
LDMGALIAGAKYRGEFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGATTLDEY
RKYIEKDAALARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPDKAIDLIDEACS
RMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKIEHLTTELEKLESKSYDMGAKWQAEKSKLQQTQKLKEEL
DRSRNELERAERDANLAKASELKYGIIPEIMKKIQEAESMDNKGLLKEIVSESDIASIISRITGIPIDTMLSSERERLLV
MEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTELTKALAGFLFDDRNAILRIDMSEYMEKH
AISRLIGAPPGYIGYDQGGVLTEAVRRRPYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLG
AEILVNQKEDEDIYKVKDEVMEYVKAVFKPEFLNRLDEIILFHRLNRNNIHDIVKIQLESLKKILLAQNIILEFDESALN
YLAEKGYDPSFGARPLKRLIQREIQNNLAKMILAGEISSGKTVKINAKDKELKVTMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 4e-160 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MCI_04465 YP_005391785.1 chaperone ClpB VFG0079 Protein 2e-161 46
MCI_04465 YP_005391785.1 chaperone ClpB VFG2084 Protein 5e-105 41