|
Name : smpB (MGAS15252_0444) Accession : YP_005388493.1 Strain : Streptococcus pyogenes MGAS15252 Genome accession: NC_017040 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : - COG ID : - EC number : - Position : 410642 - 411109 bp Length : 468 bp Strand : + Note : CDD hit: specific, cl482 = Small protein B (SmpB) is a component of the trans-translation system in prokaryotes for releasing stalled ribosome from damaged messenger RNAs; Small protein B (SmpB) is a component of the trans-translation system in prokaryote DNA sequence : ATGGCAAAAGGTGAAGGTCATATACTGGCGCAAAATAAAAAGGCTAGACATGATTATCACATTGTTGAAACCGTTGAAGC AGGGATTGTCTTAACGGGAACTGAGATTAAAAGTGTTCGTGCAGCTCGTATTCAACTGAAAGATGGCTTTGCCCAAATTA AGAATGGGGAAGCGTGGTTGGTCAACGTGCATATTGCACCTTTTGAACAAGGTAATATTTGGAACGCTGATCCTGAACGG ACCCGCAAACTGTTGCTCAAAAAACGTGAGATTACGCATCTAGCAAATGAACTTAAAGGATCTGGCATGACCTTAGTTCC TCTCAAAGTTTACCTCAAGGATGGCTTTGCTAAAGTTCTGATTGGTCTAGCTAAAGGGAAACACGAGTATGACAAACGCG AAACCATTAAACGCCGTGATCAGGAAAGAGATATAAAAAAACAAATGAAACACTACAATGCAAGGTAA Protein sequence : MAKGEGHILAQNKKARHDYHIVETVEAGIVLTGTEIKSVRAARIQLKDGFAQIKNGEAWLVNVHIAPFEQGNIWNADPER TRKLLLKKREITHLANELKGSGMTLVPLKVYLKDGFAKVLIGLAKGKHEYDKRETIKRRDQERDIKKQMKHYNAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 7e-38 | 58 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 5e-35 | 48 |
