|
Name : opuABC (MGAS15252_0194) Accession : YP_005388255.1 Strain : Streptococcus pyogenes MGAS15252 Genome accession: NC_017040 Putative virulence/resistance : Unknown Product : glycine betaine ABC transport system substrate-binding/permease protein OpuABC Function : - COG functional category : - COG ID : - EC number : - Position : 169429 - 171156 bp Length : 1728 bp Strand : + Note : CDD hit: specific, cl427 = Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic DNA sequence : TTGGAAACGATATTACAAACAAAATTACCAGTAGCTCAACTGGTGGAGCAGCTAACGGAGTGGCTAACTAAAACTTTCTC AGGTCTATTTGATATTATGCAAGTAGTTGGTAGCTTTTTGATGGATTGGATGACCAAAACACTTTTATTTATCCACCCGT TACTTTTTATTGTTCTAGTAACAGCAGGGATGTTTTTCCTTGCTAAGAAAAAATGGCCTTTGCCAACCTTTACCTTGTTA GGATTGCTCTTTATTTACAATCAAGGGTTATGGAAGCAGCTAATGAATACCTTTACTCTGGTGTTAGTAGCTAGTTTGAT TTCGGTACTTATTGGTATTCCGCTGGGGATTTGGATGGCTAAAAATGCCACTGTCCGTCAGATTGTGAATCCTATTTTGG ACTTTATGCAAACCATGCCGGCTTTTGTTTACTTGATTCCAGCCGTTGCCTTCTTTGGTATTGGTATGGTTCCGGGTGTG TTTGCCTCAGTCATCTTTGCCTTACCACCAACGGTTCGTTTTACAAATTTGGCCATTCGTGACATTCCAACAGAATTGAT TGAGGCCTCAGATGCCTTTGGGTCAACTGGGAAACAAAAGCTCTTTAAAGTGGAATTACCTTTAGCTAAAAATACTATTA TGGCAGGTGTTAATCAGACCATGATGTTAGCCCTTTCCATGGTAGTAACAGGCTCCATGATTGGTGCTCCTGGTTTAGGA CGTGAAGTCTTGTCAGCCCTTCAACACGCTGATATTGGTAGTGGATTTGTCAGTGGTCTTGCCTTGGTTATCTTGGCGAT TGTGCTTGACCGTATGACACAGTTGTTCAATAGCAAACCTCAAGAAAAAGCCAAAGCTGGCAAAACCAATAAATGGATTG GTCTAGCAGCCCTTGCTGTCTTTTTGATAGCTGCTTTAGGACGCGGTATTATGACTATGGCTTCTGGTATGGCAGATAAG GGTGAAACTGTTAACATCGCTTACGTGCAGTGGGATTCTGAGGTTGCCTCAACTCATGTGATTGCAGAAGTTTTGAAAAA CGAAGGTTACCATGTAACCTTGACACCGCTTGACAATGCTGTCATGTGGCAAACCGTTGCAAATGGGAACGCTGATTTTT CAACTAGTGCTTGGTTGCCAGTCACCCATGGCCAACAATATCAGAAATACAAGTCAAAATTAGATGATTTAGGACCTAAC CTAAAAGGGACCAAACTTGGTTTAGCTGTTCCAAAATACATGACAGATGTCAATAGTATTGAGGACTTAAGCAAACAAGC CGATCAAAAAATCACAGGGATCGAACCAGGTGCAGGTATCATGGCAGCAGCCAAAAAGACTCTAAAAGAGTATCATAATC TATCTAGTTGGGAGTTAGTGGCGGCATCAACAGGAGCCATGACGACTTCCTTGGATCAAGCGATCAAGAAAAAAGATCCT ATTGTCGTGACAGCTTGGTCACCACACTGGATGTTTGCCAAGTATGACTTGAAGTACCTTAAAGATCCTAAAGAAACCTT TGGCTCGACTGAGAACATCAATACCATTGCTCGTAAAGGCTTGAAAAAAGATCTTCCAAATGTCTACAAAATCATTGATA AGTTCCACTGGACCCAAAAAGATATGGAAGCTGTCATGCTTGACATCAACAAAGGCATGAGCCCAGAAGCTGCCGCTAAA AAATGGGTAGAGGCAAACCAATCTAAAGTATCAAGTTGGACAAAATGA Protein sequence : METILQTKLPVAQLVEQLTEWLTKTFSGLFDIMQVVGSFLMDWMTKTLLFIHPLLFIVLVTAGMFFLAKKKWPLPTFTLL GLLFIYNQGLWKQLMNTFTLVLVASLISVLIGIPLGIWMAKNATVRQIVNPILDFMQTMPAFVYLIPAVAFFGIGMVPGV FASVIFALPPTVRFTNLAIRDIPTELIEASDAFGSTGKQKLFKVELPLAKNTIMAGVNQTMMLALSMVVTGSMIGAPGLG REVLSALQHADIGSGFVSGLALVILAIVLDRMTQLFNSKPQEKAKAGKTNKWIGLAALAVFLIAALGRGIMTMASGMADK GETVNIAYVQWDSEVASTHVIAEVLKNEGYHVTLTPLDNAVMWQTVANGNADFSTSAWLPVTHGQQYQKYKSKLDDLGPN LKGTKLGLAVPKYMTDVNSIEDLSKQADQKITGIEPGAGIMAAAKKTLKEYHNLSSWELVAASTGAMTTSLDQAIKKKDP IVVTAWSPHWMFAKYDLKYLKDPKETFGSTENINTIARKGLKKDLPNVYKIIDKFHWTQKDMEAVMLDINKGMSPEAAAK KWVEANQSKVSSWTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuABC | YP_281522.1 | glycine betaine-binding protein/glycine betaine transporter permease | Not tested | Not named | Protein | 0.0 | 99 |
