|
Name : MGAS15252_1754 (MGAS15252_1754) Accession : YP_005389760.1 Strain : Streptococcus pyogenes MGAS15252 Genome accession: NC_017040 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1746677 - 1747663 bp Length : 987 bp Strand : - Note : CDD hit: non-specific, cl1316 = Integrase core domain; Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam222. This doma DNA sequence : ATGAACATGTCTAATATTAATTCTACCAGAAAATCCTCCTATTCTCATCTTTCAGCCACAGAACGGGGTGAAATTGCTGC TTATCTTAAAATGGGAAAGAAACCCGTTGAGATTGCTCGACTTCTGGGTAGTCACCGTTCTACAATCTGCCGAGAAATAA AACGTGGTTCAGTAGATCAGGTAAAGGATAAGAATGGAAAACAAACCTTCTTCAACGCCTATTTCGCTGATAGTGGACAA CGTGTCTACGAAACTAATCGTCAAAAGAGTTCTTACCTCAAGTTGAATGATTGCTTCGCTAGGTTCATTGCACAATTAGA ATCTGCCTTGACGGCTAACATTCGTCTCCATAGTGTGGATAGTTTTGTTCAGACTTACAAAGTGAACCATTCTGAAGAAG TCGTCCCCTCTACCAAAACGATTTATCATTATATCAAAGAGGGGGTGTTAGCTATTAAACCAATCGATTTGCCTAAGATG GTTAGTATCAGAAAACGTTCTAAGAAAGTCATGAAGACGAATAAGAAGACTTTAGGTAAATCTATCGAAGAACGTCCAGA ATATATTAATGATCGTTCTGAATTTGGGCATTGGGAGATTGATTTGGTTCTTGGCAAGAAAACCAAAGGTGAAGCTGTTA TGTTGACTTTGGTAGAGCGCCAGACACGCTATGCACTAGGAGTTAAGCTAGAAGACAAGCAGTCCCAAACCATTAACCGT GCTGTCACGCATCTCATCAGTCAGTATCCTATTGCATCCATCACAGCGGATAATGGTTCTGAGTTTAGTTTACTCTCAGA CTTAGAAGCTGTTGACGTTTACTTTGCACATCCCTATTCTTCACATGAGAGAGGAACAAACGAGAACTTCAATGGCCTCC TTAGAGAATATGTCCCTAAAGGAGTCTCACTTAATCCACTAACCTCTGAAGAACTTGACAATGATATTACTGCCATCAAT GAGCGCCCAAGACGACTTCTTCAATAG Protein sequence : MNMSNINSTRKSSYSHLSATERGEIAAYLKMGKKPVEIARLLGSHRSTICREIKRGSVDQVKDKNGKQTFFNAYFADSGQ RVYETNRQKSSYLKLNDCFARFIAQLESALTANIRLHSVDSFVQTYKVNHSEEVVPSTKTIYHYIKEGVLAIKPIDLPKM VSIRKRSKKVMKTNKKTLGKSIEERPEYINDRSEFGHWEIDLVLGKKTKGEAVMLTLVERQTRYALGVKLEDKQSQTINR AVTHLISQYPIASITADNGSEFSLLSDLEAVDVYFAHPYSSHERGTNENFNGLLREYVPKGVSLNPLTSEELDNDITAIN ERPRRLLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-44 | 41 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-44 | 41 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-44 | 41 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 7e-44 | 41 |
