|
Name : dexB (MGAS15252_1526) Accession : YP_005389536.1 Strain : Streptococcus pyogenes MGAS15252 Genome accession: NC_017040 Putative virulence/resistance : Unknown Product : glucan 1,6-alpha-glucosidase protein DexB Function : - COG functional category : - COG ID : - EC number : - Position : 1524198 - 1525811 bp Length : 1614 bp Strand : - Note : CDD hit: non-specific, cl7893 = Alpha amylase, catalytic domain; Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a 7 a.a. calcium-binding doma DNA sequence : ATGAAGAAACACTGGTGGCATAAAGCTACGATTTATCAGATTTACCCGAGATCCTTTAAAGACACCAGCGGCAATGGTAT TGGTGATTTAAAAGGCATTACCAGTCAACTGGACTACTTGCAAAAACTTGGCATTACAGCCATTTGGTTATCTCCTGTTT ACCAAAGTCCAATGGATGACAATGGTTATGACATCTCTGACTATGAAGCGATTGCTGATGTTTTTGGAGACATGGCAGAT ATGGATGAGCTCTTAGCAGCAGCTAATGAGCGAGGCATTAAGATTATCATGGACTTGGTGGTCAACCATACGTCTGATGA GCATGCTTGGTTTGTTGAAGCTAGGGAAAACCCTAATAGTCCTGAGCGTGATTTTTATATTTGGCGAGATGAACCTAACG ATTTGACTTCTATTTTTAGTGGCTCAGCTTGGGAATATGATAATGCATCAGGCCAATATTATTTGCACCTTTTTAGCAAA CGTCAGCCAGATCTCAACTGGGAGAATGAAGCTTTACGTCATAAAATTTACGATATGATGAATTTCTGGATTGCAAGGGG CATCGGTGGTTTTCGTATGGACGTGATTGACCTGATTGGGAAGGTTCCAGATTCTGAAATCACGGGTAACGGGCCGCGCT TACACGATTACCTCAAAGAAATGAATCAAGCAACCTTTGGCAATCATGACGTGATGACTGTCGGTGAGACTTGGGGAGCA ACGCCTGAAATTGCTCGCCAGTATTCTCGCCCTGAAAACAAAGAGTTATCCATGGTCTTCCAATTTGAGCATGTGGGTCT TCAACATAAACCTGACGCTCCCAAGTGGGATTATGCGGAAGAACTGGATGTTCCTGCTCTTAAAGCTATTTTCAGCAAGT GGCAGACAGAATTAAAGTTGGGAGAAGGCTGGAATTCGCTTTTTTGGAATAACCATGACTTGCCACGGGTCTTATCCATT TGGGGCAATGACAGCACTTACCGAGAAAAATCAGCCAAGGCTTTAGCTATTTTACTGCATTTGATGCGAGGAACCCCTTA CATTTACCAAGGAGAAGAGATTGGCATGACCAATTATCCTTTTAGAGACTTCACCGAGGTTAATGATATTGAGTCCCTTA ACTATGCTAAGGAAGCTATGGGAAATGGAGTGTCAGCTGCGCGTGTGATGGATAGCATCCGTAAGGTAGGACGAGACAAT GCTAGAACGCCGATGCAGTGGTCTAAGGATACACATGCTGGCTTTTCTAAAGCCCAAGAGACTTGGTTGCCGGTCAACCC CAACTACCAAGACATCAATGTGGCCGATGCCCTTGCTGATTCAGATTCTATTTTTTACACCTACCAAAAATTGATTGCCT TGCGTAAGGAGCAAGACTGGCTAGTTGAAGCGGATTATCACCTCTTGCCAACAGCTGATAAAGTGTTTGCTTATCAGCGT CAGCTTGGAGAAGAGACGTATGTGATTGTTGTCAATGTGTCTGATGAGGAGCAAGTCTTTGCCAAAGACTTAGCAGGTGC ACAAGTGATCATCACCAATACAGATGTGGACACGGTATTAAAGACCAAGCACTTACAACCTTGGGATGCCTTTTGTCTCA AACTGAAGGCTTAG Protein sequence : MKKHWWHKATIYQIYPRSFKDTSGNGIGDLKGITSQLDYLQKLGITAIWLSPVYQSPMDDNGYDISDYEAIADVFGDMAD MDELLAAANERGIKIIMDLVVNHTSDEHAWFVEARENPNSPERDFYIWRDEPNDLTSIFSGSAWEYDNASGQYYLHLFSK RQPDLNWENEALRHKIYDMMNFWIARGIGGFRMDVIDLIGKVPDSEITGNGPRLHDYLKEMNQATFGNHDVMTVGETWGA TPEIARQYSRPENKELSMVFQFEHVGLQHKPDAPKWDYAEELDVPALKAIFSKWQTELKLGEGWNSLFWNNHDLPRVLSI WGNDSTYREKSAKALAILLHLMRGTPYIYQGEEIGMTNYPFRDFTEVNDIESLNYAKEAMGNGVSAARVMDSIRKVGRDN ARTPMQWSKDTHAGFSKAQETWLPVNPNYQDINVADALADSDSIFYTYQKLIALRKEQDWLVEADYHLLPTADKVFAYQR QLGEETYVIVVNVSDEEQVFAKDLAGAQVIITNTDVDTVLKTKHLQPWDAFCLKLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 7e-117 | 48 |
