Gene Information

Name : ssb.1 (MGAS15252_0136)
Accession : YP_005388199.1
Strain : Streptococcus pyogenes MGAS15252
Genome accession: NC_017040
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 106119 - 106514 bp
Length : 396 bp
Strand : +
Note : CDD hit: specific, cl993 = SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryo

DNA sequence :
ATGTATAATAAAGTGATAGCAATCGGTCGTTTGGTAGCTAAACCAGAATTGGTAAAAACAGCTACGGATAAGCATGTAGC
ACGTCTCTCTTTAGCTGTTAATCGAAGATTTAAAAATGCTTCTGGAGAGCGAGAAGCTGATTTTATTTCAGTTGTTGTTT
GGGGAAAGTTAGCAGAAACTCTGGTTTCTTATGCTAGCAAAGGTAGTTTGATGTCTATTGATGGCGAACTTAGGACCCGC
AAGTATGATAAAGATGGGCAAGTGCATTATGTGACAGAAGTTCTCTGCCAATCATTTCAACTGCTTGAAAGTCGTGCTCA
GCGCGCTATGAGAGAAAATAATGTTACTAATGATCTAGTTGATTTAGTCTTAGAAGAAGATACTCTTCCCTTTTGA

Protein sequence :
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTR
KYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 8e-20 53
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-19 53
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-20 53
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 7e-22 50
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 5e-22 50
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 7e-19 49
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 4e-16 48
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-18 47
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 2e-18 46
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-18 46
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 2e-11 43