Gene Information

Name : glnA (SYNGTI_0479)
Accession : YP_005382241.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_017038
Putative virulence/resistance : Virulence
Product : glutamate--ammonia ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 531548 - 532969 bp
Length : 1422 bp
Strand : +
Note : ORF_ID:slr1756

DNA sequence :
ATGGCCAGAACCCCCCAGGAAGTCCTCAAGTGGATCCAAGACGAAAACATTAAGATTATCGACCTCAAATTTATTGACAC
GCCGGGAATTTGGCAGCACTGCTCCTTCTATTACGACCAACTTGACGAAAACTCCTTCACCGAAGGTATTCCCTTTGATG
GCTCCAGTATCCGGGGGTGGAAAGCCATTAACGAATCTGATATGTGCATGGTGCCCGACCCAAACACCGCCACCATCGAT
CCTTTCTGCAAAGAACCCACCTTGTCCATGATTTGCAGCATCAAGGAGCCCCGCACCGGGGAATGGTATAACCGTGACCC
CCGCACCATTGCGGCCAAAGCCGCTGAATATCTCCGCGGCACCGGCATTGCCGACACCGTTTACTTTGGCCCCGAAGCCG
AATTTTTCCTCTTCGATGATATTCGCTTTGGCCAAACGGAAAACTCCAGCTACTACTTTGCCGACAGTGTCGAAGGGCGT
TGGAACACTGGTCGGGAAGAAGAAGGGGGCAACCTCGGCTACAAACCAGGCTACAAACAGGGTTATTTCCCCGTGGCTCC
CACCGACACCGCCCAGGATATCCGCACAGAAATGTTGCTCACCATGGCGGCCTTTGGCGTTCCCATTGAAAAGCATCACC
ATGAAGTAGCTTCCGGTGGTCAAAACGAATTGGGCATCAAGTTCGATAAGTTGGTCAATTCCGCTGACAACTTGATGATC
TATAAGTATGTGATCAAAAACGTGGCCAAAAAGTACGGCAAAACCGTTACCTTTATGCCCAAGCCCATCTTCAACGATAA
TGGTTCCGGTATGCACGTGCACCAATCCCTCTGGAAAGATGGCCAGCCCCTCTTTGCTGGGGACAAATACGCCGGCTTTA
GCCAGATGGGTCTGTGGTATATCGGCGGGATCTTGAAACATGCCCCCGCTTTGTTGGCCTTCACTAACCCCACCACCAAC
TCCTACAAGCGCCTAGTGCCCGGTTTTGAAGCCCCCGTTAACTTGGCCTATTCCCAAGGTAACCGTTCTGCTTCCGTGCG
GATTCCCCTCTCCGGTGGTAACCCCAAGGCCAAACGTCTGGAATTCCGTTGCCCCGACGCCACCTCCAATCCCTATCTGG
CCTTTGCCGCCATGCTCTGTGCGGGCATTGACGGGATTAAAAATCAAATCGATCCCGGCGAACCCTTGGATGTGGATATC
TACGACCTCAGCCCGGAAGAATTGGCTAAGATTCCTTCCACCCCCGGCTCCCTGGAAGCGGCCTTGGAAGCGTTGGAAAA
AGACCATGAATTCCTCACCGGCACTGGTGTATTTTCCCCTGACTTTGTGGAAAGTTGGATTGAGTACAAACTGGACAACG
AAGTTAACCCCATGCGTCTGCGCCCCCACCCCTACGAATTCTCCTTGTACTACGACTGCTAA

Protein sequence :
MARTPQEVLKWIQDENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWKAINESDMCMVPDPNTATID
PFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRGTGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSVEGR
WNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSADNLMI
YKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGILKHAPALLAFTNPTTN
SYKRLVPGFEAPVNLAYSQGNRSASVRIPLSGGNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQIDPGEPLDVDI
YDLSPEELAKIPSTPGSLEAALEALEKDHEFLTGTGVFSPDFVESWIEYKLDNEVNPMRLRPHPYEFSLYYDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-101 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005382241.1 glutamate--ammonia ligase VFG1399 Protein 1e-127 57