Gene Information

Name : smpB (SYNGTI_1875)
Accession : YP_005383637.1
Strain : Synechocystis sp. PCC 6803
Genome accession: NC_017038
Putative virulence/resistance : Unknown
Product : small protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2048666 - 2049130 bp
Length : 465 bp
Strand : +
Note : ORF_ID:slr1639

DNA sequence :
ATGGCTAAGGAAAAAGAAAGGATAAAAGTTGTCAGCGATAATCGCCAGGCTCGTTTTCTGTACGAAATCTTAGAGACCTA
TGAGGCGGGCATCGAGCTGCAGGGTACTGAGGTCAAGTCAATTCGAGCAGGGAAGGTTAATTTACGGGATGGTTTTGCTC
TGCTGCGGGACGGGGAAGTCTGGTTGATGAACGTGCATATTTCGCCCTATGACAAAAGTAGTTTATTTTTTAACCATGAT
CCCCGTCGTACCCGGCGTTTGCTAATGCATAACTGGGAAATTCGGAAATTAATTGGTCAAGTTGAGCAAAAAGGCCTAAC
TTTAGTGCCGTTGAAAATGTATTTCAAGGGTAGTTGGGTAAAAGTTGCTCTGGGCCTTGGTAAAGGGAAAAAACTCCACG
ATAAACGGGAGACTTTAAAGCGTCGTCAGGATGACCGAGATATGGCTCGGGCCATGAAACGCTAA

Protein sequence :
MAKEKERIKVVSDNRQARFLYEILETYEAGIELQGTEVKSIRAGKVNLRDGFALLRDGEVWLMNVHISPYDKSSLFFNHD
PRRTRRLLMHNWEIRKLIGQVEQKGLTLVPLKMYFKGSWVKVALGLGKGKKLHDKRETLKRRQDDRDMARAMKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-24 52
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-24 48
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-17 42