Gene Information

Name : Fraau_0959 (Fraau_0959)
Accession : YP_005377109.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Unknown
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1056715 - 1057194 bp
Length : 480 bp
Strand : -
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence :
ATGGCCCGCGGCATCAACAAGGTCATCCTGGTCGGCAACCTCGGTGGCGATCCGGAGCTGCGATACACCGGCGGCGGCAC
AGCCGTCTGCCAGCTCCGCGTCGCCACAGCCGAGACCTGGAACGACAAGCAGTCCGGCCAGCGGCAGGAGCGCACCGAAT
GGCACCGCGTCGTGCTATTCGGAAAGCTGGGCGAGATTGCCCAGGAGTATCTCCGCAAGGGCCGGCAGGTCTACATCGAA
GGCTCGCTGCGCACCAAGGAATACACCGACAAGGAAGGCATCAAGCGCTTCACCACGGAAGTGATCGCCACCGATATGCA
GATGCTGAGTGGCGATGGTGGATCCAGCGGCAACCGGCAGCAGCCCGGCAATTCCCGCGGTCGTGGCCAGCAGGCCAACC
AGCGCGGCCATGCCCAGCAACACGAGCCTCCGCCGGATCAGGGCGCCCCGCCCTTCGATGACGACGATATCCCCTTCTAG

Protein sequence :
MARGINKVILVGNLGGDPELRYTGGGTAVCQLRVATAETWNDKQSGQRQERTEWHRVVLFGKLGEIAQEYLRKGRQVYIE
GSLRTKEYTDKEGIKRFTTEVIATDMQMLSGDGGSSGNRQQPGNSRGRGQQANQRGHAQQHEPPPDQGAPPFDDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 4e-37 52
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 4e-37 52
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 3e-37 52
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-25 46
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-27 45