Gene Information

Name : Fraau_0777 (Fraau_0777)
Accession : YP_005376930.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 852888 - 853568 bp
Length : 681 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
GTGGCAAGAGTTCTGATCATTGAAGATGATGAGGTGACCGCACGCGAGATTGCCACCGAATTGTCGGGGCACGGCATGCA
GGTCGAATGGGTAGGCAGCGGTCAGGACGGTCTGGATCGCGCCGCGACGGGGCGCTATGACGTGATCACCCTGGATCGCA
TGCTGCCTGGGCTGGACGGCATCGAGGTGATCGGGCGTTTGCGTGAGCGCGGCGTGCAGACGCCGGTATTGATGATCAGT
GCGCTCAGCGACGTGGATGATCGCATCCGTGGGCTGCGTGCCGGTGGCGATGACTATCTGACCAAGCCTTTTGCGCCCGA
CGAAATGGCGGCACGGGTCGAGGTGCTGCTGCGTCGGCACGACACCGGCCAGACGCGTTCCCAGTTGAAGGTGGCCGATC
TGGAGCTGGACCTGCTTTCGCGCACGGCCCGGCGAGGGGAGGCCGAGTTGAATCTGCTGCCGACCGAGTTCCGGCTGTTG
GAGTTTCTGATGCGCCATTCCGGTCAGGTCCTGACCCGGATGATGCTGTTCGAGACGGTATGGGGCCTCAATTTCGATCC
GGGTACCAATCTGATCGACGTGCATATCGGGCGACTGCGCCGCAAGGTTGACCCGGCCGGCAGCGAGCCGCTGATCCACA
CCGTGCGCGGTTCAGGTTATCGTCTGGGCAAGCATGTCTGA

Protein sequence :
MARVLIIEDDEVTAREIATELSGHGMQVEWVGSGQDGLDRAATGRYDVITLDRMLPGLDGIEVIGRLRERGVQTPVLMIS
ALSDVDDRIRGLRAGGDDYLTKPFAPDEMAARVEVLLRRHDTGQTRSQLKVADLELDLLSRTARRGEAELNLLPTEFRLL
EFLMRHSGQVLTRMMLFETVWGLNFDPGTNLIDVHIGRLRRKVDPAGSEPLIHTVRGSGYRLGKHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-33 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 3e-42 48
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 4e-40 47
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 1e-43 46
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 2e-40 46
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-42 45
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 2e-42 44
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0638 Protein 3e-35 43
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 1e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 2e-35 45
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 8e-38 42
Fraau_0777 YP_005376930.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 1e-33 42