Gene Information

Name : Fraau_0537 (Fraau_0537)
Accession : YP_005376701.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 601831 - 603534 bp
Length : 1704 bp
Strand : -
Note : PFAM: Amidohydrolase family; Urease alpha-subunit, N-terminal domain; TIGRFAM: urease, alpha subunit

DNA sequence :
ATGAGCCGCCTTGATCGAATCGCCTATGCCGAGATGTATGGCCCCACCGTGGGCGACCGGGTACGGCTGGCCGATACGGC
GCTGATGGTCGAGGTCGAACGCGACTTCACGATCCATGGCGAAGAGGTGAAGTTCGGTGGCGGCAAGGTGATCCGCGACG
GTATGGGGCAGAGTCAGCGGCACAGTGCCGACTGCGCCGACACGGTGATCACCAATGCCTTGATCATCGACCACTGGGGC
ATCGTCAAAGCCGATGTCGGCCTCAAACATGGCCGCATCAGCGGCATCGGCAAGGCCGGAAATCCGGACATCCAGCCCGG
CGTCAGCATCGTGATCGGCCCGGGTACCGAAATCATTGCCGGCGAAGGCCTGATCCTGACGGCCGGCGGCATCGATACCC
ATATCCATTTCATCGCGCCGCAACAGATCGAAGAGGCACTGATGTCCGGCATCACCACCATGATCGGCGGCGGCACCGGA
CCGGCCACGGGCACCAAGGCCACCACCTGCACCCCCGGCCCCTGGCACCTGCAGCGCATGCTGGAGGCGGCCGAGGCCTT
CCCGATGAATCTGGGCTTTCTGGGCAAGGGCAATGCCAGCCTGACCGGCGCCTTGCACGAACAGGTCGAGGCCGGCGCGG
TCGGCCTGAAACTGCACGAGGACTGGGGTACCACCCCGGCAGCCATCGACGCGGCCCTGCAGGTGGCCGAAGCCACCGAC
ACCCAGGTCGCGATCCATACCGATACGCTCAATGAATCGGGCTTCGTGGAAACCACGCTGGCCGCCTTCAAGGGCCGCGC
CATCCACACCTACCATACCGAAGGCGCCGGCGGCGGCCATGCCCCGGACATCATCAAGGCAGCCTCGCTGTCCAACGTGC
TGCCCAGCTCGACCAATCCGACCCGGCCGTTCACGGTCAATACGGTGGACGAACATCTGGACATGCTGATGGTCTGTCAC
CATCTGGATCCGGCGATTGCCGAAGATGTCGCCTTTGCCGAAAGCCGGATCCGTCGCGAGACCATCGCCGCCGAAGATAT
CCTGCATGACATCGGCGCCTTTTCGATGATCAGCTCCGATTCCCAGGCCATGGGCCGGGTCGGCGAGGTGATCACCCGCA
CCTTCCAGACCGCGCACAAGATGAAGGTCCAGCGCGGCGCCCTGGCCCCGGATACCGCCCGACATGACAATTTCAGGGTC
AAACGCTATCTGGCCAAGATCACCATCAACCCGGCGATCACCCATGGCATCGCCCATGAGGTGGGCTCGGTCGAAGTCGG
AAAATGGGCCGACCTGGTGCTGTGGAAACCGGCCTTCTTCGGCGTGAAGCCGGCCCTGATCCTGAAAGGTGGCAGCATCG
CGGCCGCGCCGATGGGTGATCCCAATGCCTCGATCCCGACCCCGCAGCCGGTGCATTACCGGCCGATGTTTGCCAGCTAC
GGCCGCAGTCTCACCGCCAGCTCGCTGACCTTTGTCTCCCAGCTGGCTCTGGATCAAGGTCTGGGCGAGCGGCTGCATCT
GGACAAGCCGCTGGTCGCGGTCCGTCGCTGTCGTGACATCGGCAAGCAGGACATGGTCCACAACGATGCCTGTCCGGACA
TCCGCGTGGACCCGCAGACCTATGTTGTCGTCGCCGATGGCGAACCGCTGTGGTGCGAGCCGGCCACCGAGCTGCCGATG
GCACAGCGCTATTTCCTGTTCTGA

Protein sequence :
MSRLDRIAYAEMYGPTVGDRVRLADTALMVEVERDFTIHGEEVKFGGGKVIRDGMGQSQRHSADCADTVITNALIIDHWG
IVKADVGLKHGRISGIGKAGNPDIQPGVSIVIGPGTEIIAGEGLILTAGGIDTHIHFIAPQQIEEALMSGITTMIGGGTG
PATGTKATTCTPGPWHLQRMLEAAEAFPMNLGFLGKGNASLTGALHEQVEAGAVGLKLHEDWGTTPAAIDAALQVAEATD
TQVAIHTDTLNESGFVETTLAAFKGRAIHTYHTEGAGGGHAPDIIKAASLSNVLPSSTNPTRPFTVNTVDEHLDMLMVCH
HLDPAIAEDVAFAESRIRRETIAAEDILHDIGAFSMISSDSQAMGRVGEVITRTFQTAHKMKVQRGALAPDTARHDNFRV
KRYLAKITINPAITHGIAHEVGSVEVGKWADLVLWKPAFFGVKPALILKGGSIAAAPMGDPNASIPTPQPVHYRPMFASY
GRSLTASSLTFVSQLALDQGLGERLHLDKPLVAVRRCRDIGKQDMVHNDACPDIRVDPQTYVVVADGEPLWCEPATELPM
AQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 6e-175 71
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 6e-175 71
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-157 60
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-157 60
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 1e-157 60
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 1e-157 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_0537 YP_005376701.1 urease subunit alpha VFG0270 Protein 2e-155 64