Gene Information

Name : Fraau_0533 (Fraau_0533)
Accession : YP_005376697.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 598091 - 599536 bp
Length : 1446 bp
Strand : -
Note : PFAM: Catalase; Catalase-related immune-responsive

DNA sequence :
ATGAGCGACGAACGCAAAATACTGACCACCGATGCCGGTGCCGCGATCCCCGACAACCAGAACAGTCTGACCGCCGGTGC
GCGCGGGCCGCTGCTGGTACAGGATCACCAGCTCTTCGAAAAGCATGCCCACTTCAATCGCGAGCGCATCCCCGAGCGCG
TGGTGCATGCCAAGGGCTCGGCCGCCTTCGGCACGCTCACCATCACCCAGGACATCAGCCGCTACACCCGCGCGGCCGTG
CTGCAGCAAGGCGTGCAGACCCCGATGCTGGCCCGCTTCTCGACCGTCGCCGGCGAGCGCGGTGCCGCGGATGCCGAGCG
TGACGTGCGCGGCTTCGCCCTGAAGTTCTATACCAGCGAAGGCAACTGGGATCTGGTCGGCAACAATACTCCGGTGTTCT
TCGTCCGCGATCCGTTCAAGTTCCCGGACTTCATCCACACCCAGAAACGCGATCCGCGCAACAATATGCGCAGCAATACC
GCGCAATGGGACTTCTGGTCGCTGTCGCCGGAATCGCTGCACCAGGTCACCATCCTGATGAGCGACCGCGGCCTGCCCGC
CAGCCTGCGCCACATGCATGGCTTCGGCAGCCATACCTACAGTCTGATCAATGCCGGCAATGAAAGGGTCTGGGTGAAGT
TCCACTTCAAGACCCGCCAGGGCATCAGAAACTGGACCAATGCCACCGCGAATGCCGCCATCGGCGAAGATCGCGAAACC
CATCAGCGGGACTTGTTCGACAGCATCGAAAAAGGCGACTTCCCCAAATGGGGCGTCTATATCCAGGTGATGAGCGAAAC
CCAGGCCGCCGAGCTGCCTTACAACCCCTTCGACCTGACCAAGGTCTGGTCGCAAAAAGAGTTCCCGCTGATCGAAGTCG
GCGAGTTCGAGCTCAATCGCAACCCGGACAATTATTTCGCCGAAGTCGAGCAGGCCAGCTTCTCGCCGGCCAACGTCGTT
CCAGGCATCGCACACAGCCCCGACAAGATGCTGCAGTTCCGCATTTTCTCCTATGCCGATGCAGCCCGTTACCGGCTCGG
CATCAATCACGACCAATTGCCGGTCAACCAGCCACGCTGCCCGGTGCACAATTACTACAGGGACGGCCAGATGCGCTTCG
GCGACAATGCCAAGGGCGCCGTCAACTACGAGCCAAACTCGTTTGGCGGTCCGGTCGAGGATCCCTCAGTGAAAGAGCCG
CCCCTGCCGCTGGAAGGTGCCGCCGATCGATACGACCATCGCGTTGACAGCGACTACTACAGCCAGCCCGGAGCCCTGTT
CCGACTGATGGACGACGGGCAGAAGCAGCAGCTGTTCGACAATATCGCGGGCGCCATGGCCGGTGTTCCGGACTTCATCA
TCGAGCGCCAGCTGGGGCATTTCGAGAAAGCCGACCCCGCCTATGCCGCCGGCGTCCGCAAGGCCTTGACCAAAGCCACC
GGCTGA

Protein sequence :
MSDERKILTTDAGAAIPDNQNSLTAGARGPLLVQDHQLFEKHAHFNRERIPERVVHAKGSAAFGTLTITQDISRYTRAAV
LQQGVQTPMLARFSTVAGERGAADAERDVRGFALKFYTSEGNWDLVGNNTPVFFVRDPFKFPDFIHTQKRDPRNNMRSNT
AQWDFWSLSPESLHQVTILMSDRGLPASLRHMHGFGSHTYSLINAGNERVWVKFHFKTRQGIRNWTNATANAAIGEDRET
HQRDLFDSIEKGDFPKWGVYIQVMSETQAAELPYNPFDLTKVWSQKEFPLIEVGEFELNRNPDNYFAEVEQASFSPANVV
PGIAHSPDKMLQFRIFSYADAARYRLGINHDQLPVNQPRCPVHNYYRDGQMRFGDNAKGAVNYEPNSFGGPVEDPSVKEP
PLPLEGAADRYDHRVDSDYYSQPGALFRLMDDGQKQQLFDNIAGAMAGVPDFIIERQLGHFEKADPAYAAGVRKALTKAT
G

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 8e-144 66
katA YP_005126717.1 catalase Not tested Not named Protein 6e-105 50
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 2e-102 47
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 2e-102 47
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 2e-102 47
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 2e-102 47