Gene Information

Name : Fraau_0463 (Fraau_0463)
Accession : YP_005376632.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 518357 - 519079 bp
Length : 723 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCTGAAGATGAGCCATCTGGCCAAGGTCTACCGTACCGAAGTGGTCGAGACCTACGCCTTGCGCGATTTCAACATCGA
TGTGAAAGAAGGCGAATTCGTGGCCGTCACCGGTCCCTCGGGTTCCGGCAAGACCACCTTCCTGACCATTGCCGGTCTGC
TGGAAACCTTTTCCGGCGGCACCTACCATCTGGATGGCCTCGAGGTCAGCCAGCTCAACGACAATGCCCGCTCGAAGATT
CGCAACGAAAAGATCGGCTTTATCTTCCAGGCCTTCAATCTGATCCCCGACCTGAATGTCTACGACAATATCGAGGTGCC
GCTGCGCTATCGCGGCATGAAAGGTGCCGAGCGCAAGCGACGGATTCTCGAATCACTGGAGCGGGTGGGCCTGTCATCCC
GCGCCAAACACTATCCGGCCGAACTCTCCGGCGGGCAGCAGCAGCGCGTAGCCATTGCCCGTGCGCTGGCCGGCAGTCCG
CGCCTGCTGCTGGCGGATGAACCGACCGGCAATCTGGACACCCAGATGGCCAGGAGCGTGCTCGAACTGCTGGAAGAAAT
CCATCGCGAAGGCGCCACCATCGTGATGGTGACCCATGATCCCGAACTGGCTGCCCGCGCCCAGCGCAATGTCCACATCA
TCGATGGCCAGGTGGTGGATCTGGCCGAGGATCCGCGCTTCCATGCCGCGGTAATGGCTGCCCAGCAGCAGGATATGGGC
TGA

Protein sequence : 
MLKMSHLAKVYRTEVVETYALRDFNIDVKEGEFVAVTGPSGSGKTTFLTIAGLLETFSGGTYHLDGLEVSQLNDNARSKI
RNEKIGFIFQAFNLIPDLNVYDNIEVPLRYRGMKGAERKRRILESLERVGLSSRAKHYPAELSGGQQQRVAIARALAGSP
RLLLADEPTGNLDTQMARSVLELLEEIHREGATIVMVTHDPELAARAQRNVHIIDGQVVDLAEDPRFHAAVMAAQQQDMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-35 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-35 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_0463 YP_005376632.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 7e-50 47
Fraau_0463 YP_005376632.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-42 46
Fraau_0463 YP_005376632.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-36 45
Fraau_0463 YP_005376632.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-32 42