Gene Information

Name : Fraau_3251 (Fraau_3251)
Accession : YP_005379256.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3554301 - 3555299 bp
Length : 999 bp
Strand : +
Note : PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase

DNA sequence : 
TTGCGCGACAATACCGCCGCCACGGCAAGCACGATCCAGGCCGACCCGGCTCGCTCCCTGTCATCCCTGAAGGACATTAT
GACTATTCCCAAGCTGCTACGCATCGCCACCCGCAAGAGCCTGCTCGCCTTGTGGCAGGCCGAGCACGTTGCCGCGCTGC
TGCGCGAGCGCTATCCGCAGACCCAGGTGGAACTGGTACCGCTGTCGACCCGCGGCGACGAGATCCTGGACCGTTCGCTG
GCGGCCATCGGCGGCAAGGGACTGTTTCTGAAGGAGCTGGAAGTGGCGATGCTGGAAGGCCGTGCCGACCTGGCCGTGCA
TTCGCTCAAGGACATGCCGGTCGAACTCGACCCCGGCTTCGCCCTGGCCGCCGTGCTGCCTCGCGCCGATGCCGCCGATG
CCTTTGTCAGCTTCCACCATGCCAGCCTGCAGGCCCTGCCGCAGGGAGCACGCGTCGGCACTTCCTCGCTGCGCCGGCAG
GCTTTGCTGCGTTCGCTGCGTCCGGATCTGCAGATCAATGATCTGCGCGGCAATGTCATCACCCGCCTGGCCAAGCTGGA
AGAAGGCCAGTATGACGCCATCATCCTGGCCTGTGCCGGGCTGGAACGGCTTGAGCTGGGCCAGCATATCCGCCAGCGCC
TGCATGCCCCGGACTGGTTGCCGGCCCCCGGCCAGGCCGCGATCGGCATCGAGGCCCTCAGTGCCGCCGACGATGTCCTG
GCCGGCCTGGCCGCGCTCGACGATGCGCCCACCCGCCGTCAGGTCACCGCCGAGCGGGCCATGAACCAGGCCCTGGGCGG
CAGTTGCAGCGTGCCGGTCGGTGCCTGGTGCGAGCAGATCGATGCCGACTGGCTGGTGCTCAGTGGCCTGGTCGGCGACA
TTGCCGGCGGCCAGCTGATCCAGGCCAGCCAGCACGGCGAGGCCGCCCAGCCCGAGGTTCTTGGCCGGGCGGTGGCGGAG
CAGCTGCTGGCACAGGGCGCAGCGGCCTTCCTGAGCTGA

Protein sequence : 
MRDNTAATASTIQADPARSLSSLKDIMTIPKLLRIATRKSLLALWQAEHVAALLRERYPQTQVELVPLSTRGDEILDRSL
AAIGGKGLFLKELEVAMLEGRADLAVHSLKDMPVELDPGFALAAVLPRADAADAFVSFHHASLQALPQGARVGTSSLRRQ
ALLRSLRPDLQINDLRGNVITRLAKLEEGQYDAIILACAGLERLELGQHIRQRLHAPDWLPAPGQAAIGIEALSAADDVL
AGLAALDDAPTRRQVTAERAMNQALGGSCSVPVGAWCEQIDADWLVLSGLVGDIAGGQLIQASQHGEAAQPEVLGRAVAE
QLLAQGAAAFLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-51 51
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-51 51