Gene Information

Name : Fraau_3137 (Fraau_3137)
Accession : YP_005379144.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : multidrug ABC transporter ATPase/permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3408208 - 3409932 bp
Length : 1725 bp
Strand : +
Note : PFAM: ABC transporter transmembrane region; ABC transporter

DNA sequence :
ATGCGGCCGGTCAGAGGCCGCATCCGCCTCGCCATGCTGCTGGCCGCACTGGGTGCGGCCGCGACCCTGGCGACTCTGGC
CGCACTGGCCTGGGCGCTGCAGCAACTGCTGCAGCATCCCGACCACTGGCCCTGGCCGGCCTTGCTGGTGGCCGCGACCT
CGACCGCACTGGCTTTCGGACTGCGGCTGACCGCCTTCAATCGTTCGCACTACGCGGCCTTTGCCTTGGAAACACAGCTG
CGCACCCGGCTTTCCGAACATCTGGCCCGTATTCCGCTGGGACGGGTCCAGCATCAGGGACCGGCGGCGCTGGCCAAGGT
GATGATGGATGATGTAAAGGAAATGCACGTCTTTGTGGCCGACAGTACCCCACTGTATGCCCGCGCCTATGTCTCGCCCC
TGCTGACCCTCGCCTTGCTGTGCTGGCTGGACTGGCGACTGGCGCTGGCGGCCAGTGGCGTGCTGGTTCTGGGTCTGGCC
GCGGTGTCCCTGGCCCTGCTCGGCAGCAAGGAGACCTTCAGGCGCTACCACCAGGCGGCCGAGCATGTCAGCAAGGCCGT
CGTGGAATATGTCCAGGCCATGCCGGTGGTGAGGACCTTCGACACCGGCAGCGAAACCTTCGGGCGCTATCAGCAGGCAT
TGCAGGTCTATCGTGATGTGGTCATCCAGTGGTACCGCGCCAACGGCCTGCCGGCCCGGCTGTCTCAGATCATCCTCAGC
CCGTTGCCCAGCCTGCTGGTGCTGCTGTGGCTGGGTACCTGGCTGCTGCAAAAGCAGCAGCTGGCCATCGGCGACTGGCT
TGCCGTGCTGCTGATCGGCGGTGGCATGGCCGAATCGCTGATGCCGGTCATCTCGCTCAAGCATATGGTGGCCCGTGCCG
AGGTCAGTATCCGGCGCATTCACGAAGTGATGGCGATAACGCCGCAACCACTGCCCCCTGTGGACAAGGCACAACACCCC
GCTGACGGCAGCGTTCGCTTCGAGCAAGTGGATTTCAGCTATGAAGCCGGCGGCCCCAAGGTTCTGCAGCAGGTCAGCTT
CGAGGTGCCAGCGGGCCAGTTCACCGCCCTGGTCGGCCCCTCTGGCGCCGGCAAGAGCACCATCGCCCAGCTGATTCCAC
GCTTCTGGGACGTGGATGCCGGCTGCATCCGGGTCGGCGGTGCGGATGTGCGCGAGATGCTGCCGGATACCTTGCTGCAA
CAGGTCGCCTTCGTGTTCCAGGACAGCTTCCTGTTTGCCGGCAGCCTGCTCGACAATATCCGCCTGGGGCAACCCCAGGC
CAGCCCGCAGGAAGTCATGGAAGCCGCCAGGGCCGCGCAGGCCCACGACTTCATCATGGCCCTGCCGCAAGGTTATGACA
CCCCCGCCGGCGAGCGCGGAACCTCTCTGTCTGGCGGTCAACGCCAGCGCGTCACCATCGCCCGCACCATATTGCAGAAT
CGTCCGATCCTGGTACTGGACGAGGCCACCGCCTTTGCCGACCCAGAGAACGAGGCCGCCCTGGTGCTGGCGCTGTCCCA
TCTGATGCGCGGCAAGACGGTGCTGATGGTGGCCCACCGACTCGCCACCATCCGCGATGCCGACCAGATCCTGGTCTTCG
AACAGGGCCGTCTGGTCGAACAAGGTCGGCATGCCGACCTGCTCGCCCAGGCCGGCTGCTATGCCCGCCTGTGGCAGGCC
GGCGAACGTGCCGGCCACTGGACGCTGCAGAGGGGGCACGCATGA

Protein sequence :
MRPVRGRIRLAMLLAALGAAATLATLAALAWALQQLLQHPDHWPWPALLVAATSTALAFGLRLTAFNRSHYAAFALETQL
RTRLSEHLARIPLGRVQHQGPAALAKVMMDDVKEMHVFVADSTPLYARAYVSPLLTLALLCWLDWRLALAASGVLVLGLA
AVSLALLGSKETFRRYHQAAEHVSKAVVEYVQAMPVVRTFDTGSETFGRYQQALQVYRDVVIQWYRANGLPARLSQIILS
PLPSLLVLLWLGTWLLQKQQLAIGDWLAVLLIGGGMAESLMPVISLKHMVARAEVSIRRIHEVMAITPQPLPPVDKAQHP
ADGSVRFEQVDFSYEAGGPKVLQQVSFEVPAGQFTALVGPSGAGKSTIAQLIPRFWDVDAGCIRVGGADVREMLPDTLLQ
QVAFVFQDSFLFAGSLLDNIRLGQPQASPQEVMEAARAAQAHDFIMALPQGYDTPAGERGTSLSGGQRQRVTIARTILQN
RPILVLDEATAFADPENEAALVLALSHLMRGKTVLMVAHRLATIRDADQILVFEQGRLVEQGRHADLLAQAGCYARLWQA
GERAGHWTLQRGHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtP YP_853073.1 inner membrane ABC-transporter Not tested PAI IV APEC-O1 Protein 6e-112 58
irp6 YP_001006813.1 lipoprotein inner membrane ABC-transporter Not tested HPI Protein 5e-112 58
ybtP NP_669704.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 4e-112 58
ybtP NP_993009.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 4e-112 58
irp6 YP_002346904.1 lipoprotein inner membrane ABC transporter Not tested HPI Protein 4e-112 58
ybtP YP_070126.1 lipoprotein inner membrane ABC-transporter Virulence HPI Protein 4e-112 58
ybtP CAA21388.1 - Virulence HPI Protein 4e-112 58
irp6 CAB46573.1 lipoprotein inner membrane ABC-transporter, Irp6 Virulence HPI Protein 1e-111 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_3137 YP_005379144.1 multidrug ABC transporter ATPase/permease BAC0432 Protein 2e-112 58