Gene Information

Name : Fraau_2405 (Fraau_2405)
Accession : YP_005378452.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2571494 - 2572441 bp
Length : 948 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family

DNA sequence : 
ATGTCCGATCTCCACAAGTCTTCATCACCCGGGCCGGATCCCGGCAGTCCCGCCCAGGCCAGCGCCGCCGACCGGCAACG
CATTGCCGGTTTCATCGAGCGGATCTGGTCCGAACATGGTCTGGCCGAACGCACGCTGGAGGCCTATCGCAGTGATCTGC
TGGGACTGGGCGGCTGGCTGGCGGGGCGCCATCGCGAACTGGTTTCCGCCCGTCGCGAGGATCTGGCGGCCTACCAGGGC
TCGGCGCCGCTGTCGGTGCGTTCGATGGCACGCCGGCAATCGGCGTTCAGGCGCTTCTATGCCGATCTGGCCCGCCGCCA
GCCGGGCTTCGACGACCCGACCCTGCTGCTGGAACGGCCCAGATTGCCGCGCGGCGTGCCCAAGGCCTTGGGTGAAGGCC
AGATCGAGGCCTTGCTGCAGGCGCCGGACGAGAGCACTTCGCTGGGGCTGCGCGACAAGGCGATGCTGGAGCTGATGTAT
GCCTCGGGCCTGCGCGTGTCCGAGCTGGTCGAGCTGCCGCTGGCCGGTCTGAACCGGCGGCAGGCGGTATTGCGCATCAC
CGGCAAGGGGGGCAAGGACCGACTGGTTCCGGTGGCCGAACTGTCGCAGCGCTGGGTCGAACGCTATCTGGATGAAGTGC
GCCCGATGCTGGCCGGACCCCGCCAGCCCGAGGCCTTGTTTCTCAGTCGGCGTGGCGAGGGCATGACCCGGCAGATGTTC
TGGACCTTGATCAAGCGTTACGCCGTGCAGGTCGGCATCGCCAGCGACAAGGTCTCGCCGCATGTGCTGCGACACTCATT
CGCCACCCATCTGCTGAACCACGGCGCCGATCTGCGATCCCTGCAGATGCTGCTGGGCCACAGCGCGCTCAGCACCACCC
AGATCTACACCCTGGTGGCCAAGGAAGGCCTGAAGCGGCTGCACGCCATGCATCATCCGCGCGGTTGA

Protein sequence : 
MSDLHKSSSPGPDPGSPAQASAADRQRIAGFIERIWSEHGLAERTLEAYRSDLLGLGGWLAGRHRELVSARREDLAAYQG
SAPLSVRSMARRQSAFRRFYADLARRQPGFDDPTLLLERPRLPRGVPKALGEGQIEALLQAPDESTSLGLRDKAMLELMY
ASGLRVSELVELPLAGLNRRQAVLRITGKGGKDRLVPVAELSQRWVERYLDEVRPMLAGPRQPEALFLSRRGEGMTRQMF
WTLIKRYAVQVGIASDKVSPHVLRHSFATHLLNHGADLRSLQMLLGHSALSTTQIYTLVAKEGLKRLHAMHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-53 56
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-53 56