Gene Information

Name : Fraau_2389 (Fraau_2389)
Accession : YP_005378437.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2552291 - 2555023 bp
Length : 2733 bp
Strand : +
Note : PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS

DNA sequence :
ATGCCGGGATCACGTCCGCTGCAGAAATGGCCCGGACCGTTACAATGGCCAATTGCCCGCAACCGAACCGACGCGGGAAC
CCTTTGCCCCGCCTCACGCGGCCACCACTACCTGAATGTATATTGCCGATTGATGGACATCTCCCCCGCCAGCACCGCTG
ACAAAGCCCACACCCCGATGATGCGCCAGTATCTGGCCAACAAGGCGGCGCACCCCGATGTGCTGCTGTTTTTCCGTATG
GGCGATTTCTACGAGCTGTTCTATGACGACGCCCGCAAGGCGGCACGGCTGCTCGACATCACCTTGACCACGCGCGGCCA
GTCCGCCGGCGAGCCGATTCCGATGGCCGGCGTGCCGTATCACGCGGTGGAAAACTATCTGGCCCGGCTGGTCAAGCTGG
GCGAATCGGTGGCGATCTGCGAGCAGATGGGTGATCCAGCCCTGTCCAAGGGGCCGGTCGAACGCAAGGTGGTCCGCATC
GTCACCCCGGGTACGGTCACCGATGCCGCCCTGCTGGAAGAGCGGCGTGACAATCTGCTGTTGTCCATTGCCGCCGGGCA
GGGCGGTGCCTTCGGCCTGGCCTGGGTGGATCTGGCCAGCGGGCGCTTCGTGCTTGGCGAGGTACCCAGTGCCGAAGCCC
TGGCCGCCGAGCTGGCCCGCCTGCAGCCGGCCGAAACCCTGATCGGTGACGACCAGTCCTGGCCAGCCGTGGTGACCCGT
TTGCCGGGTCTGCGCCGGCGGCCCCCCTGGCATTACGAATCCGATGCGGCTCGGCGCGAGCTGAACCGCTTTTTCGGCAC
CCGCGACCTGGACGGTTTCGGTGTCGATGGCATGACCTTGGCCATTTCAGCGGCTGGCGCCCTGCTGGGTTATGTCGAGG
AAACCCAGAAGAGCGCGCTGCCCCATCTGACTGGCATGTCGGTGGAAAGCCAGGCCGATACCGTGGCGCTGGATGCCGCC
ACACGTCGAAATCTGGAACTGGACACCCACCCGACCGGCCGCACCGAATACACCTTGCTGGGTGTCCTGGACGAGACGGT
GACACCAATGGGCGCGCGTCTGCTGCGGCGTTGGCTGAACCGTCCGCTGCGCAGCCGCGCCGTGCTGAAGGCACGTCAGC
AAGCCATCGCCGCCCTGCTGAACGGGCGCGAATACGAAGGACTACGCGAGCAGTTGCGCGCCATCGGCGATCTGGAGCGG
ATCCTGGCTCGTGTCGCGCTGCGTTCGGCCCGGCCCCGCGATCTGGCGACCCTGCGCGACGGCCTGGCCGCCGCCCCTGC
ACTGCGCCAGCAGTTGCAGGCACTGGATGCCCCCTTGCTGCACCAGCTGGTGGAACGCATCGGCGACCATGCAGAAACGG
CTGCCGAACTGGCCCGCGCGATCCTGCCGCAGCCACCGCAACTGCTGCGCGACGGTGGCGTCATCGCCGAAGGCTATGAC
AGCGAACTGGACGAACTGCGTAGACTGTCCACCCATGCCGACCAGTATCTGGTCGAACTGGAAGAGCGCGAAAAGGCCGC
CAGCGGACTCAGCACCCTGAAGGTCGGCTACAACCGGGTGCATGGCTATTACATCGAGATCAGCAAGAGCCAGTCGGAGA
AAGCACCGACCCACTACACCCGCCGGCAGACCACCAAGAATGCCGAGCGCTATATCACCGAGGAGCTGAAAGGCTTCGAA
GACAAGGTGCTGTCGGCCAAGGAACGTTCGCTGATGCGCGAACGTGCCTTGTACGAAGCCCTGCTGGAAACTCTGGTGGC
CGGACTGGAGCCGCTGAAGTCGGCGGCTTCGGCCATCGCCGAGCTGGACGTGCTGGCCGATCTGGCCGAGCGCGCTGACC
AGCTGAACTGGGCAGCCCCCGAGCTCGTCGAGGAGGCCGGCATCCGCATCGAGCGCGGGCGCCATCCGGTCGTGGAAAAA
GTCCGTGACGAGCCCTTCGAGCCGAACGACCTGATGCTGGATCGCGAAACGCGCATGCTGGTGATCACCGGTCCCAATAT
GGGCGGCAAATCGACGTATATGCGCCAGAATGCCTTGATCACGCTGCTGGCTCATATCGGCAGCTACGTACCGGCCGACA
AGGCGGTGATCGGGCCGGTGGATCGCATTTTCACCCGTATCGGCGCAGGTGATGACTTGTCCCGTGGCCAGTCGACCTTC
ATGGTCGAGATGAGCGAGACGGCCAATATCCTGCACAATGCCACGGCCCACAGTCTGGTGCTGATGGACGAAGTCGGTCG
TGGCACCAGTACGTATGACGGTCTGGCCCTGGCCAAGGCGGCGGCCGTCCATCTGGGACGGCACTCCTGCGCCTACACCT
TGTTCGCCACCCATTATTTCGAACTGACCGAACTGGCGGCCCATTATCCGGCGATCGAGAACGTGCATCTGGACGCGGTG
GAATATGGCGACCAGCTGATCTTCATGCATGCGGTCAAGCCCGGCCCGGCCAATCGCAGCTTCGGCCTGCAGGTAGCCGC
CCTGGCCGGCCTGCCGCGATCGGTGATCGCCGATGCGCGCCGCACCCTGACCGAACTGGAACGCGGCCACAGCAAGCCGG
CCAAGGACAGCCCGCAGCTGGGCCTGTTCGCCCAGACCCCGGCACCGGCCCCCTTGCCGCCGGAACCCTCGCCGGCCGAA
GTCGCACTGGCCGATATCGACCCCGACCAGCTGACGCCGCGCCAGGCCCTGGAAGCCTTGTATCGGCTGAAGGATATGCT
GCCCGCCAGCTGA

Protein sequence :
MPGSRPLQKWPGPLQWPIARNRTDAGTLCPASRGHHYLNVYCRLMDISPASTADKAHTPMMRQYLANKAAHPDVLLFFRM
GDFYELFYDDARKAARLLDITLTTRGQSAGEPIPMAGVPYHAVENYLARLVKLGESVAICEQMGDPALSKGPVERKVVRI
VTPGTVTDAALLEERRDNLLLSIAAGQGGAFGLAWVDLASGRFVLGEVPSAEALAAELARLQPAETLIGDDQSWPAVVTR
LPGLRRRPPWHYESDAARRELNRFFGTRDLDGFGVDGMTLAISAAGALLGYVEETQKSALPHLTGMSVESQADTVALDAA
TRRNLELDTHPTGRTEYTLLGVLDETVTPMGARLLRRWLNRPLRSRAVLKARQQAIAALLNGREYEGLREQLRAIGDLER
ILARVALRSARPRDLATLRDGLAAAPALRQQLQALDAPLLHQLVERIGDHAETAAELARAILPQPPQLLRDGGVIAEGYD
SELDELRRLSTHADQYLVELEEREKAASGLSTLKVGYNRVHGYYIEISKSQSEKAPTHYTRRQTTKNAERYITEELKGFE
DKVLSAKERSLMRERALYEALLETLVAGLEPLKSAASAIAELDVLADLAERADQLNWAAPELVEEAGIRIERGRHPVVEK
VRDEPFEPNDLMLDRETRMLVITGPNMGGKSTYMRQNALITLLAHIGSYVPADKAVIGPVDRIFTRIGAGDDLSRGQSTF
MVEMSETANILHNATAHSLVLMDEVGRGTSTYDGLALAKAAAVHLGRHSCAYTLFATHYFELTELAAHYPAIENVHLDAV
EYGDQLIFMHAVKPGPANRSFGLQVAALAGLPRSVIADARRTLTELERGHSKPAKDSPQLGLFAQTPAPAPLPPEPSPAE
VALADIDPDQLTPRQALEALYRLKDMLPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_2389 YP_005378437.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 59