Gene Information

Name : Fraau_0238 (Fraau_0238)
Accession : YP_005376416.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 284548 - 285087 bp
Length : 540 bp
Strand : -
Note : PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase

DNA sequence :
ATGTCTGAGATAGTCGGTTACGCCCGTGTCAGCACTTCTGGCCAAACTTTAGACATCCAGCAAGAGAAGTTACACGCGGC
TGGCTGCACACGCATCTTTTCCGAAAAAAAGTCAGGGCGTCAGGCCGACAACCGTCCGGAGTTACAAAGTTGCCTGCAGT
TTCTCCGTGATGGAGACACCCTTGTCATTACCAAGCTTGATCGAATGGCGCGTTCAGTACTAGATCTGGCCAAGATTGCC
GATGTACTACGCACAAAGGGCGTCGCCCTCAAAGTACTCGACCAAGCCATCGATACCACCAGACCTGAAGGTCGTCTGAT
GTTCAGCTTGCTTGGCGCGTTTGCGCAGTTCGAAAATGATATTCGGGCTGAGCGACAACTCGAAGGCATCGCCAAGGCGA
AGCAGAAGTGTGTTGCCTTTGGAAGAAAGCGCGCACTGACCCCAGAACAATGCGAGCGGGTCACGATACTTCGGCGCGAC
GAGAAGTTTTCCATAGCTCAGATAGCAGAACGCTTCAATGTAGGCCCTGCCACGATCTAG

Protein sequence :
MSEIVGYARVSTSGQTLDIQQEKLHAAGCTRIFSEKKSGRQADNRPELQSCLQFLRDGDTLVITKLDRMARSVLDLAKIA
DVLRTKGVALKVLDQAIDTTRPEGRLMFSLLGAFAQFENDIRAERQLEGIAKAKQKCVAFGRKRALTPEQCERVTILRRD
EKFSIAQIAERFNVGPATI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res YP_005124341.1 DNA-invertase Not tested Not named Protein 1e-22 47
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 3e-22 43
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 3e-22 43
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 3e-22 43
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 5e-22 43
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 5e-22 43
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 3e-22 43
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 1e-20 43
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 5e-22 43
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 5e-22 43
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 4e-22 43