Gene Information

Name : Fraau_1984 (Fraau_1984)
Accession : YP_005378053.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2107522 - 2107743 bp
Length : 222 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory protein (AlpA)

DNA sequence :
ATGTCTCATCTGGTATCGCAGCAAGCCCCTGTCGCCCGCCTGATCCGTATTGCCGAGGTGGAGCGCACCACCGGCCTCAA
GCGCGCCTCCATCTACCGGCACATGGCTGCCGGCACCTTTCCCGCCAGCATCAAGCTGAGTCCGGCCTGCACGGCCTGGT
CTGAGGCTGAGGTACAGGCCTGGATCGCCCAGCGCATCGCCGCCTCGAGGGAGGCCGCCTGA

Protein sequence :
MSHLVSQQAPVARLIRIAEVERTTGLKRASIYRHMAAGTFPASIKLSPACTAWSEAEVQAWIAQRIAASREAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 1e-10 50
unnamed CAA21398.1 - Not tested HPI Protein 5e-11 47
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 3e-11 47
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 1e-09 46
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-10 46
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-10 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_1984 YP_005378053.1 putative transcriptional regulator VFG1141 Protein 4e-11 46