Gene Information

Name : Fraau_1547 (Fraau_1547)
Accession : YP_005377648.1
Strain : Frateuria aurantia DSM 6220
Genome accession: NC_017033
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1638409 - 1639089 bp
Length : 681 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGTATCCTTGTCGTTGAAGATGATCCCTCGATTGCCTCCGGTGTCTGCGCCTCGCTGCGCCAGGGCGGGCATGCGGT
CGATCATATGACTGACGGCGGCCAGGCCGACACCGCGCTGCGCGATACGCCTTATGATCTGGCCGTACTGGACCTGGGCC
TGCCCGGACTCGATGGCAGCGAGATCTTGCAGCGCCTGCGCAAGCGCGGCACCCAGTTGCCGGTACTGATCCTGACCGCC
CGGGAAGGCCTGCGCGAACGGGTCAGAGTTCTGGATCTGGGCGCCGATGATTACCTGGTCAAGCCCTTCGCCCTGGTGGA
GTTCGAAGCCAGAGTCCGCGCCCTGCTGCGCCGGGCCTCGGCTCAGGGCATGCCCGAACTGCAGATCGGCCGCCTGCGTC
TGGATCTGCCCGGACACCGGATCTGGCTCGACGATGAACCCCTGGAGCTGACGGCCCGTGAATTCGGCCTGCTGGAAGCC
TTGGCCAGCCGCCCCGACCGGGTCACCAGTCGCGCCCAACTGGTGGAGGCCCTTTGCAGCTGGGACGAAGAGCTGACCGA
CAATGGTCTGGACATCGCCATCCATCGGCTGCGCCGCAAATTGTCGGGATCCGGAGCCAATGTCCGCACCATCCGTGGTC
TGGGCTATCTGTTGGAGGAGGACACGGAACCCTCCCCGTGA

Protein sequence : 
MRILVVEDDPSIASGVCASLRQGGHAVDHMTDGGQADTALRDTPYDLAVLDLGLPGLDGSEILQRLRKRGTQLPVLILTA
REGLRERVRVLDLGADDYLVKPFALVEFEARVRALLRRASAQGMPELQIGRLRLDLPGHRIWLDDEPLELTAREFGLLEA
LASRPDRVTSRAQLVEALCSWDEELTDNGLDIAIHRLRRKLSGSGANVRTIRGLGYLLEEDTEPSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_1547 YP_005377648.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 8e-35 42
Fraau_1547 YP_005377648.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 8e-32 42
Fraau_1547 YP_005377648.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002516.2.879194.p Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fraau_1547 YP_005377648.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0473 Protein 2e-38 45