Gene Information

Name : ureC (COCOR_07674)
Accession : YP_005373625.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9598271 - 9599986 bp
Length : 1716 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCGCAAGCTGGACAGGCGCCACTACGCGGACATGTTTGGTCCCACGACGGGGGACCGGGTGCGGCTGGGGGACAC
CGGCCTGTGGCTCCAGGTGGAGCGCGACGCCACCGTGTACGGCGACGAGTGCAAGTTCGGCGGCGGCAAGGTGCTGCGCG
AAGGCATGGGCCAGCGCGCGGGCACGGGCGACGCGGACGCGCTCGACTGCGTCATCACCAACGCGCTCGTGGTGGACTGG
ACGGGCATCTTCAAGGCGGACGTGGGTATCAAGGCGGGGCGCATCTCCGCCATCGGCAAGGCGGGCAACCCGGACGTCAT
GGCGGGCGTCACGCCGGGCATGGTGGTGGGCGTCACCACGGAGGTCATCGCCGGTGAAGGGCTCATCCTCACCGCGGGCG
GCCTGGACACGCACATCCACTTCATCAGCCCGCAGCAGGCGGACGAAGCCATCGCCAGCGGCATCACCACCTGGGTGGGC
GGCGGCACCGGCCCGGCCACCGGCACCAACGCCACCACCTGCACGCCGGGCGCGTGGAACCTGGCGCGCATGCTGGAGGC
CACGGACACGCTTCCCCTGAACATCGGCCTCACCGGCAAGGGCAACACGTCCCTGCCGGAGGGCTTGTTGGATCAGGTGC
GCGCGGGCGCCATCGGACTCAAGCTGCATGAAGACTGGGGCACCACGCCCGCGGCCATCGACACGTGCCTCACGCTGGCG
GACGCGGAGGACGTGCAGGTCACCATCCACACGGACACGCTGAACGAGTCCGGCTACGTGGATGACTCGCTGGCGGCGTT
CAAGGGCCGGACCATCCACACGTACCACTCGGAGGGCGCGGGCGGCGGCCACGCGCCGGACATCATCCGCGTGTGCGGCG
CGCCCAACGTGCTGCCCAGCTCCACCAACCCCACGCGGCCGTACACGGTGAACACGCTGGACGAGCACCTGGACATGCTC
ATGGTGTGTCACCACCTGGACCGCGAGATTCCCGAGGACGTGGCCTTCGCGGAGAGCCGCATCCGCGGAGAGACGATTGC
CGCGGAGGACATCCTCCACGACCTGGGCGCCATCAGCATGATGGCCTCCGACAGCCAGGCCATGGGCCGCGTGGGCGAGG
TCATCACCCGCACGTGGCAGACGGCGCACAAGATGCGCGAGCAGCGCGGGCGGCTCCCCGGCGAGCAGGGCGACAACGAC
AACCTGCGCATCCGCCGCTACGTGGCGAAGTACACCATCAACCCGGCCATCGCCCACGGGCTGTCCCACGAGGTGGGCTC
CGTGGAGCCAGGCAAGCTCGCGGACCTGGTGCTGTGGCGGCCCGCCTTCTTCGGCGCGAAGCCGGAGCTGGTGCTCAAGG
GCGGCTTCATCGCGTGGGGGCAGATGGGGGACGCGAACGCGTCCATCCCCACGCCGCAGCCGTACCTCATGCGCCCCATG
TTCGGCGCGCGAGGACGGGCGCGGGGCTCCACGAGCCTCGCGTTCGTGTCCGGGCGCGCGCTGCGGGAAGGCACCGTGCA
GGGGCTGGGGCTCACCAAGCGGCTGTCCGCGGTGGTGAACTGCCGCGCGCTGGGCAAGAAGGACATGCGCCTCAACGACG
CGCTGCCGGTCATCACGGTGGACCCTGAGACGTACGAGGTCCGCGCGGACGGGGAGCTGCTTCGCTGCGAGCCCGCCACC
TGGCTGCCCCTGGCGCAGCGCTACTCGCTGTTCTGA

Protein sequence :
MSRKLDRRHYADMFGPTTGDRVRLGDTGLWLQVERDATVYGDECKFGGGKVLREGMGQRAGTGDADALDCVITNALVVDW
TGIFKADVGIKAGRISAIGKAGNPDVMAGVTPGMVVGVTTEVIAGEGLILTAGGLDTHIHFISPQQADEAIASGITTWVG
GGTGPATGTNATTCTPGAWNLARMLEATDTLPLNIGLTGKGNTSLPEGLLDQVRAGAIGLKLHEDWGTTPAAIDTCLTLA
DAEDVQVTIHTDTLNESGYVDDSLAAFKGRTIHTYHSEGAGGGHAPDIIRVCGAPNVLPSSTNPTRPYTVNTLDEHLDML
MVCHHLDREIPEDVAFAESRIRGETIAAEDILHDLGAISMMASDSQAMGRVGEVITRTWQTAHKMREQRGRLPGEQGDND
NLRIRRYVAKYTINPAIAHGLSHEVGSVEPGKLADLVLWRPAFFGAKPELVLKGGFIAWGQMGDANASIPTPQPYLMRPM
FGARGRARGSTSLAFVSGRALREGTVQGLGLTKRLSAVVNCRALGKKDMRLNDALPVITVDPETYEVRADGELLRCEPAT
WLPLAQRYSLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 6e-161 65
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 6e-161 65
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 2e-155 60
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 8e-156 60
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 8e-156 60
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 8e-156 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ureC YP_005373625.1 urease subunit alpha VFG0270 Protein 9e-153 62