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Name : pilB (COCOR_06288) Accession : YP_005372241.1 Strain : Corallococcus coralloides DSM 2259 Genome accession: NC_017030 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 7906219 - 7907919 bp Length : 1701 bp Strand : - Note : - DNA sequence : ATGTCCGGTCGACTCGGTGAATTGCTGGTGCGCGAGAATCTCATCTCCGTCCAGCAACTCCGCAAGGCGCAGGAGGAGCA GCAGAAGAGTGGTGCGCGCATCGGCACGGCGCTCATCAAGACGGGCGCCATCGAGGAGTCGAAGCTCACCGACTTCCTGT CGAAGCAGTACGGCGTCCCGGCCATCAACCTGAAGGACTTCGACATTGATCCGGACATCATCAAGCTCGTGCCCAAGGAA GTGGCCGAGAAGCACCTGGTGATCCCGGTCAACCGCGCGGGCCCGTCCCTCATCGTGGCCATGTGCGACCCGTCCAACAT CTTCGCGGTGGACGACCTGAAGTTCCTCACCGGCTACAACATCGAAGCCGTCGTCGCGTCCGAAATCTCCATCCGCGAAT CGATTGAGCGCTACTACGCGGAGAAGGGCCCCTCGCTGGAGGACATCGTCGGCGACGTGGGCGACGACATTGAAGTCGCC AAGGAGGAGCAGGAGAACGTGGATGAGATGGCCAGGGCCGCGGATGACGCGCCCGTGGTCAAGCTGGTGAACCTCATCCT CATGGACGCCATCAAGAAGCGCGCGTCCGACATCCACATCGAGCCGTACGAGAAGGATTTCCGGGTCCGCTTCCGCATCG ACGGCGTGATGTACGAGGTGATGCGCCCGCCCATGAAGCTGCGCAACGCCATCACCAGCCGTCTCAAGATCATGGCGTCG CTGGACATCTCCGAACGGCGCCTGCCGCAGGACGGCCGCATCAAGATCAAGATCGGCGGCGGCAAGGAGATGGACTTCCG CGTGAGCGTGTGCCCCACGCTCTTCGGCGAGAAGGTCGTGATGCGCTTGCTCGACAAGAGCAACCTGCAGCTGGACATGA CGAAGCTGGGCTTCGACGCGCAGCCCCTGGCCTGGTTCAAGGAGGCCATCGACCGGCCCTACGGCATGGTGCTGGTGACG GGTCCCACGGGCTCCGGCAAGACGACGACGCTGTACTCCGCGCTCTCCAGCCTCAACGACGTGGGCACCAACATCTGCAC CGCGGAGGACCCGGTCGAGTTCAACTTCGCCGGCATCAACCAGGTGCAGATGCATGAAGACATCGGCCTGAACTTCGCGG CCGGCCTGCGCTCCTTCCTCCGCCAGGACCCCGACATCATCATGATCGGTGAGATCCGCGACTTCGAGACGGCGGAAATC GGCGTGAAGGCGGCGCTCACGGGCCACCTGGTGCTCTCCACGCTGCACACCAACGACGCCCCGGGCACGGTCAGCCGTCT GCTCAACATGGGCATCGAGCCGTTCCTCGTGACGGCGTCGCTCAACCTCATCCTCGCCCAGCGTCTGGCGCGCCGGCTGT GCCCCGCGTGCAAGCGCCCCGCGGAGAAGGTGGACGAGCAGGCCCTCATCGACGCGGGCATCCCGCCGGACAAGATGGGC ACCTTCACCATGTACGAGAAGGTCGGCTGCCGCGAGTGCAACGACCGCGGCTACCGCGGCCGCGTGGCCATCTACGAGGT CATGCCCTTCTGGGACGGCCTCAAGGAGCTGGTCATCAACGGCGCCTCCGCCGCGGAGCTCAAGCAGGAGGCCATCCGCC TGGGCATGAGCAGCCTGCGCATGAGCGCGCTCAAGAAGCTCATGGACGGCATGACCACGCTCGAAGAGGTCGTGGGCAAC ACCGCGCCGGACCGCTTCTAG Protein sequence : MSGRLGELLVRENLISVQQLRKAQEEQQKSGARIGTALIKTGAIEESKLTDFLSKQYGVPAINLKDFDIDPDIIKLVPKE VAEKHLVIPVNRAGPSLIVAMCDPSNIFAVDDLKFLTGYNIEAVVASEISIRESIERYYAEKGPSLEDIVGDVGDDIEVA KEEQENVDEMARAADDAPVVKLVNLILMDAIKKRASDIHIEPYEKDFRVRFRIDGVMYEVMRPPMKLRNAITSRLKIMAS LDISERRLPQDGRIKIKIGGGKEMDFRVSVCPTLFGEKVVMRLLDKSNLQLDMTKLGFDAQPLAWFKEAIDRPYGMVLVT GPTGSGKTTTLYSALSSLNDVGTNICTAEDPVEFNFAGINQVQMHEDIGLNFAAGLRSFLRQDPDIIMIGEIRDFETAEI GVKAALTGHLVLSTLHTNDAPGTVSRLLNMGIEPFLVTASLNLILAQRLARRLCPACKRPAEKVDEQALIDAGIPPDKMG TFTMYEKVGCRECNDRGYRGRVAIYEVMPFWDGLKELVINGASAAELKQEAIRLGMSSLRMSALKKLMDGMTTLEEVVGN TAPDRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-86 | 48 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-86 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_005372241.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 2e-88 | 49 |
| pilB | YP_005372241.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 2e-87 | 49 |
| pilB | YP_005372241.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 1e-108 | 47 |
| pilB | YP_005372241.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 2e-80 | 46 |
| pilB | YP_005372241.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 3e-113 | 44 |
| pilB | YP_005372241.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 1e-100 | 41 |
