Gene Information

Name : fliQ1 (COCOR_06138)
Accession : YP_005372091.1
Strain : Corallococcus coralloides DSM 2259
Genome accession: NC_017030
Putative virulence/resistance : Virulence
Product : putative type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7737985 - 7738254 bp
Length : 270 bp
Strand : -
Note : -

DNA sequence :
ATGACCCAGGACGTCCTGCTCACCCTGGGGCGTGAAGCCCTGCTGTTGATGGTGCTCGCCTCGCTGCCGCCCATTGGCGC
GAGCCTGCTGGTGGGCTTCCTGATGAGCCTCTTCCAGGCAACGACCCAGTTGCAGGAGAGCACGCTGTCGGTGGTGCCCA
AGCTGTGCGCGGCGGTGCTGTCCCTCGTGCTGGCGGGGCCGTGGATCGCCGGACAGCTCACTCGCTTCACCCAACAGCTC
CTCATGCTCATCGCGGACGTGGCGCTGTGA

Protein sequence :
MTQDVLLTLGREALLLMVLASLPPIGASLLVGFLMSLFQATTQLQESTLSVVPKLCAAVLSLVLAGPWIAGQLTRFTQQL
LMLIADVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 7e-07 43
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 7e-07 43
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 7e-07 43
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 3e-08 42
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 3e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ1 YP_005372091.1 putative type III secretion system protein VFG0043 Protein 2e-07 45
fliQ1 YP_005372091.1 putative type III secretion system protein VFG1260 Protein 9e-10 44
fliQ1 YP_005372091.1 putative type III secretion system protein VFG0187 Protein 1e-05 42